Information on IMD54

Name: Immunodeficiency 54 | Acronym: IMD54
Alt. names: MCM4 deficiency | immunodeficiency-54 | Primary immunodeficiency with natural-killer cell deficiency and adrenal insufficiency | Russell-Silver syndrome

Gene: MCM4 | MOI: Autosomal recessive | Mechanism of action: Loss of Function

No. of cases in DB: 20 | First reported in: 2012

Last updated on: 2023-03-29 16:10:48 by Xiao P. Peng

OMIM: 609981

Orphanet: 75391

MONDO: 0012383

DOID: 0111967

ClinGen: Moderate (2023-08-17)

Description

At least 8 unrelated kindreds with biallelic MCM4 loss-of-function have now been described in at least 4 studies, three of which report molecular genetic findings (PMID: 16532402, 22354167, 22354170, 22499342). Both pathogenic mutations described thus far are thought to lead to truncated Mcm4 proteins with loss of the N-terminal region whose post-translational modification is crucial for regulating pre-initiation complex assembly and replisome progression. This genome instability syndrome features severe intra-uterine growth retardation, postnatal failure to thrive, microcephaly, non-malignant lymphoproliferation, adrenal insufficiency or isolated glucocorticoid deficiency, hyperpigmentation, delayed bone age, and recurrent viral infections, often respiratory. Affected individuals may have increased cancer susceptibility as a consequence of their cellular genome instability. All patients have low peripheral blood NK cell counts (<5% of normal) with T and B cell counts being grossly unaffected. Patient lymphocytes also showed increased chromosomal breakage after treatment with DEB, mitomycin C, and nitrogen mustard but breakage rates remained relatively low and affecting only a minority of cells, unlike in Fanconi anemia patients.

Management

Antimicrobial prophylaxis may be considered for those with recurrent infections, while those with adrenal insufficiency and/or isolated glucocorticoid deficiency may require corticosteroid replacement therapy. There are currently no screening guidelines for managing the potentially increased malignancy risk.

Summary of clinical findings

[Considering only Definitive and Possible cases]

Rank Clinical phenotype Present Absent Unreported
1 Small for gestational agearrow icon 17 (85.0%) 0 (0.0%) 3 (15.0%)
2 Reduced NK cell numberarrow icon 16 (80.0%) 0 (0.0%) 4 (20.0%)
3 Adrenal insufficiencyarrow icon 12 (60.0%) 0 (0.0%) 8 (40.0%)
4 Hyperpigmentation of the skinarrow icon 11 (55.0%) 0 (0.0%) 9 (45.0%)
5 Intrauterine growth retardationarrow icon 11 (55.0%) 0 (0.0%) 9 (45.0%)
6 Failure to thrivearrow icon 11 (55.0%) 0 (0.0%) 9 (45.0%)
7 Decreased head circumferencearrow icon 8 (40.0%) 0 (0.0%) 12 (60.0%)
8 short staturearrow icon 7 (35.0%) 0 (0.0%) 13 (65.0%)
9 (unusual) Respiratory tract infectionarrow icon 5 (25.0%) 0 (0.0%) 15 (75.0%)
10 Global developmental delayarrow icon 5 (25.0%) 1 (5.0%) 14 (70.0%)
11 Postnatal growth retardationarrow icon 5 (25.0%) 0 (0.0%) 15 (75.0%)
12 Recurrent lower respiratory tract infectionsarrow icon 3 (15.0%) 0 (0.0%) 17 (85.0%)
13 Microcephalyarrow icon 3 (15.0%) 0 (0.0%) 17 (85.0%)
14 Lung diseasearrow icon 3 (15.0%) 0 (0.0%) 17 (85.0%)
15 Respiratory failurearrow icon 3 (15.0%) 0 (0.0%) 17 (85.0%)
16 Hypoglycemiaarrow icon 3 (15.0%) 1 (5.0%) 16 (80.0%)
17 Pulmonary fibrosisarrow icon 2 (10.0%) 0 (0.0%) 18 (90.0%)
18 Triggered by EBV infectionarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
19 Lymphadenopathyarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
20 Decreased growth hormone levelsarrow icon 1 (5.0%) 2 (10.0%) 17 (85.0%)
21 Hepatopathyarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
22 Reduced proportion of CD8 T cellsarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
23 Splenomegalyarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
24 Abnormal lymphoproliferationarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
25 Bronchiectasisarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
26 Hepatomegalyarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
27 Lymphoproliferative disorderarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
28 Interstitial pneumonitisarrow icon 1 (5.0%) 0 (0.0%) 19 (95.0%)
29 (unusual) Viral infectionarrow icon 1 (5.0%) 1 (5.0%) 18 (90.0%)
Age of onset
distribution

Summary of treatment outcomes

[Considering only Definitive and Possible cases]

Treatment ⓘ Responses & clinical indications

20 reported cases added to GenIA

SubjectID Sex Fam.ID AD AFM Validity Country Population Reference & Pub.code
102419arrow icon M 214948tree icon 13 Ireland Irish Traveller PMID:16532402 [Fam.A:IV.8(P1)]; PMID:22354167 [Fam.A:IV.8(P1.1)]
102433arrow icon M 214951tree icon Ireland Irish Traveller PMID:22354167 [Fam.B:II.1(P2.1)]
102507arrow icon F 214948tree icon 21 9 Ireland Irish Traveller PMID:16532402 [Fam.A:IV.9(P2)]; PMID:22354167 [Fam.A:IV.10(P1.2)]
102509arrow icon M 214948tree icon 16 2 Ireland Irish Traveller PMID:16532402 [Fam.A:IV.12(P3)]; PMID:22354167 [Fam.A:IV.12(P1.3)]
102511arrow icon M 214948tree icon 15 3 Ireland Irish Traveller PMID:16532402 [Fam.A:IV.14(P4)]; PMID:22354167 [Fam.A:IV.14(P1.4)]
102512arrow icon F 214948tree icon 10 Ireland Irish Traveller PMID:16532402 [Fam.A:IV.15]; PMID:22354167 [Fam.A:IV.15(P1.5)]
102523arrow icon M 214965tree icon 3 Ireland Irish Traveller PMID:22354170 [Fam.C:II.1(P1)]
102528arrow icon M 214965tree icon 12 Ireland Irish Traveller PMID:22354170 [Fam.C:II.4(P2)]
102555arrow icon F 214967tree icon 5 Ireland Irish Traveller PMID:22354170 [Fam.B:II.4(P6)]
102572arrow icon F 214967tree icon Ireland Irish Traveller PMID:22354170 [Fam.B:II.12(P8)]
102573arrow icon M 214967tree icon 1 Ireland Irish Traveller PMID:22354170 [Fam.B:II.13(P7)]
102578arrow icon F 214968tree icon 5 Ireland Irish Traveller PMID:22354170 [Fam.A:IV.3(P5)]
102621arrow icon F 214968tree icon 8 Ireland Irish Traveller PMID:22354170 [Fam.A:V.2(P3)]
102625arrow icon M 214968tree icon 1 Ireland Irish Traveller PMID:22354170 [Fam.A:V.6(P4)]
102653arrow icon F 214977tree icon Ireland Irish Traveller PMID:22499342 [Fam.1:III.11(III:11)]
102711arrow icon F 214977tree icon Ireland Irish Traveller PMID:22499342 [Fam.1:IV.4(IV:4)]
102716arrow icon M 214977tree icon Ireland Irish Traveller PMID:22499342 [Fam.1:IV.9(IV:9)]
102717arrow icon F 214977tree icon Ireland Irish Traveller PMID:22499342 [Fam.1:IV.10(IV:10)]
102720arrow icon F 214977tree icon Ireland Irish Traveller PMID:22499342 [Fam.1:IV.12(IV:12)]
103466arrow icon M 215133tree icon Ireland Irish Traveller PMID:22499342 [Fam.3:II.1(II:1)]

AD: Age at genetic diagnosis; AFM: age at first manifestation; PMID: PubMed ID; GRID: GenIA reference ID (ref. not in PubMed).