Information on IMD55

Basic details

Name: Immunodeficiency 55 | Acronym: IMD55
Alt. names: Combined immunodeficiency due to GINS1 deficiency | Combined immunodeficiency with intrauterine growth retardation-NK cell deficiency-neutropenia

Gene: GINS1 | MOI: Autosomal recessive | Mechanism of action: Loss of Function

No. of cases in DB: 6 | First reported in: 2017

Last updated on: 2023-10-23 05:30:21 by Xiao P. Peng

OMIM: 617827

Orphanet: 505227

MONDO: 0044725

DOID: 0111993

ClinGen:

Description

Cottineau et al. (2017) identified compound heterozygous GINS1 mutations in 5 patients from 4 families with a recessively inherited syndromic immunodeficiency characterized by intrauterine and postnatal growth retardation, recurrent viral and bacterial infections, mild facial dysmorphism, skin problems (i.e. eczema, ichthyosis, psoriasis), lymphadenopathy, autoimmunity (i.e. protein-losing enteropathy, hypothyroidism, autoimmune hemolytic anemia), malignancy (osteosarcoma in 1 patient), and some features of premature aging. Immunophenotyping was notable for G-CSF-responsive chronic neutropenia and an almost complete lack of circulating NK cells that could not be overcome by cytokine treatment, in addition to low levels of other circulating ILC and invariant T lymphocyte populations. Additionally, patient had low or normal numbers of circulating T and B cells, often with low CD8+ T cell counts, as well as high IgA levels, low IgM levels, and low to normal IgG levels. T cell proliferative responses to mitogen and antigen stimulation were slightly decreased.

Management

Most patients received some form of anti-microbial prophylaxis, whilst two with autoimmune manifestations received immunoglobulin replacement therapy and one also received G-CSF for neutropenia. Two others received growth hormone treatment for their post-natal growth impairment. While some patients have been described to develop cancers, given the rarity of this condition, it is difficult to conclude at present whether or not there is increased malignancy risk and if so, what the level of risk and tissue spectrum of tumors may be. Thus, clinical vigilance is warranted but no guidance regarding surveillance is available.

6 reported cases added to GenIA

SubjectID Sex Fam.ID AD AFM Validity Country Population Reference & Pub.code
103473arrow icon F 215134tree icon 23 -1 France French PMID:28414293 [Fam.A:II.1(P1)]; PMID:14702466 [Fam.1:II.1(P1)]
103477arrow icon F 215134tree icon 17 -1 France French PMID:28414293 [Fam.A:II.3(P2)]; PMID:14702466 [Fam.1:II.3(P2)]
103478arrow icon M 215135tree icon 7 -1 France French PMID:28414293 [Fam.B:II.1(P3)]
103482arrow icon F 215136tree icon 29 -1 United Kingdom British PMID:28414293 [Fam.C:II.1(P4)]
103485arrow icon F 215137tree icon 18 -1 France French PMID:28414293 [Fam.D:II.1(P5)]
103488arrow icon F 215138 12 0 Brazil Brasilian PMID:31630891 [P9]

AD: Age at genetic diagnosis; AFM: age at first manifestation; PMID: PubMed ID; GRID: GenIA reference ID (ref. not in PubMed).

Summary of clinical findings

[Considering only Definitive and Possible cases]

Rank Clinical term Present Absent Unreported
1 Recurrent lower respiratory tract infectionsarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
2 Reduced NK cell numberarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
3 (unusual) Respiratory tract infectionarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
4 Intrauterine growth retardationarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
5 Neutropeniaarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
6 Facial dysmorphismarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
7 Infection of the gastrointestinal tractarrow icon 5 (83.3%) 0 (0.0%) 1 (16.7%)
8 Lymphadenopathyarrow icon 4 (66.7%) 1 (16.7%) 1 (16.7%)
9 Abnormal lymphoproliferationarrow icon 4 (66.7%) 1 (16.7%) 1 (16.7%)
10 (Unusual) bacterial infectionarrow icon 4 (66.7%) 0 (0.0%) 2 (33.3%)
11 Recurrent viral infectionsarrow icon 4 (66.7%) 1 (16.7%) 1 (16.7%)
12 (unusual) Viral infectionarrow icon 4 (66.7%) 1 (16.7%) 1 (16.7%)
13 Postnatal growth retardationarrow icon 4 (66.7%) 1 (16.7%) 1 (16.7%)
14 Eczemaarrow icon 3 (50.0%) 0 (0.0%) 3 (50.0%)
15 Atopic dermatitisarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
16 Myeloid maturation arrestarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
17 Lymphopeniaarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
18 Reduced proportion of CD8 T cellsarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
19 Lung diseasearrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
20 Enteropathyarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
21 Atopyarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
22 Diarrheaarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
23 Varicella zoster virus infectionarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
24 Hypogammaglobulinemiaarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
25 Pneumoniaarrow icon 2 (33.3%) 0 (0.0%) 4 (66.7%)
26 Psoriasiform lesionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
27 Abscessarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
28 Decreased IgG levelsarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
29 Erythroid dysplasiaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
30 Hypothyroidismarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
31 Persistent CMV viremiaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
32 Villous atrophyarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
33 Gastrointestinal inflammationarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
34 Eosinophiliaarrow icon 1 (16.7%) 3 (50.0%) 2 (33.3%)
35 Recurrent upper respiratory tract infectionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
36 Decreased growth hormone levelsarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
37 Lipoatrophyarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
38 Recurrent ear infectionsarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
39 Dry skinarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
40 Thin skinarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
41 Folliculitisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
42 Glaucomaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
43 RSV bronchiolitisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
44 Small for gestational agearrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
45 Ichthyosisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
46 Decreased IgM levelsarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
47 Autoimmunityarrow icon 1 (16.7%) 3 (50.0%) 2 (33.3%)
48 Increased IgE levelsarrow icon 1 (16.7%) 2 (33.3%) 3 (50.0%)
49 short staturearrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
50 Recurrent S. aureus infectionsarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
51 Bronchiectasisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
52 Autoimmune hemolytic anemiaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
53 Endocrine system abnormalityarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
54 Coombs Test Positivearrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
55 Autoimmune cytopeniaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
56 Herpes Simplex Virus Infectionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
57 Allergyarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
58 Pulmonary fibrosisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
59 Progeroid facial appearancearrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
60 Myelodysplasiaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
61 Respiratory failurearrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
62 Food allergyarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
63 Protein-losing enteropathyarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
64 Cytomegalovirus infectionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
65 (unusual) Fungal infectionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
66 Autoimmune antibody positivityarrow icon 1 (16.7%) 3 (50.0%) 2 (33.3%)
67 Erythrodermaarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
68 Severe Adenovirus infectionarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
69 Skin infections arrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
70 Dysplastic granulopoesisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)
71 Hemophagocytosisarrow icon 1 (16.7%) 0 (0.0%) 5 (83.3%)

Summary of treatment outcomes

[Considering only Definitive and Possible cases]

Treatment ⓘ Responses & clinical indications