Information on TLIND

Basic details

Name: T-cell lymphopenia with or without nail dystrophy, AD | Acronym: TLIND
Alt. names: FOXN1 haploinsufficiency

Gene: FOXN1 | MOI: Autosomal dominant | Mechanism of action: Haploinsufficiency

No. of cases in DB: 71 | First reported in: 2005

Last updated on: 2023-04-01 03:28:58 by Xiao P. Peng

OMIM: 618806

Orphanet: 169095

MONDO: 0032928

DOID: -

ClinGen:

Description

To date, 61 patients from 58 families have been described with heterozygous loss-of-function FOXN1 variants resulting in FOXN1 haploinsufficiency associated with low TREC levels and T cell lymphopenia at birth that progressively improves with age (PMID: 15897400, 31566583, 31447097). Nail dystrophy, recurrent sinorespiratory tract infections (predominantly viral), evidence of thymic hypoplasia or aplasia on imaging, dental caries, dermatitis and skin rashes, and hair abnormalities were the most common findings. A minority of patients also suffered from recurrent GI infections and mucocutaneous candidiasis. Immunophenotyping was notable for persistent lymphopenia during infancy affecting predominantly CD8+ T cells, decreased lymphocyte proliferative responses to mitogens, and abnormal numbers of B and NK cells in a minority of patients. One or few patients additionally had intellectual disability, failure-to-thrive, variable inflammatory findings, and congenital anomalies such as ventricular septal defects, polydactyly, Arnold-Chiari malformation, and tracheoesophageal fistula. Most adults showed normal CD4+ T cell counts but a lower than normal proportion of naive CD4+ T cells, suggesting that normalization of total CD4+ T cell count with age is contributed by homeostatic proliferation.

Management

Anti-microbial prophylaxis and early and aggressive treatment of infections may be beneficial. HSCT is unlikely to be a curative treatment given the thymus-intrinsic defect. Indeed, of the three patients receiving HSCT before molecular diagnosis, two remained T cell lymphopenic after transplant despite successful engraftment and a third died of transplant-related complications 2 years post-HSCT. Given the normalization of T cell lymphopenia over time, it remains to be seen whether thymic transplant may be needed in severe cases.

71 reported cases added to GenIA

SubjectID Sex Fam.ID AD AFM Validity Country Population Reference & Pub.code
102911arrow icon M 215012 1 0 PMID:31447097 [P1]; PMID:37419334 [P1(22)]
102912arrow icon M 215013 2 0 PMID:31447097 [P2(II.1)]; PMID:37419334 [P2(22)]
102913arrow icon M 215014 1 0 PMID:31447097 [P3]
102915arrow icon F 215016 4 0 PMID:31447097 [P4]; PMID:37419334 [P4(22)]
102916arrow icon F 215017 3 0 PMID:31447097 [P5]; PMID:37419334 [P5(22)]
102917arrow icon M 215018 1 0 PMID:31447097 [P6]; PMID:37419334 [P6(22)]
102918arrow icon F 215019 2 0 PMID:31447097 [P7]; PMID:37419334 [P7(22)]
102919arrow icon F 215020 3 0 PMID:31447097 [P8(II.1)]; PMID:37419334 [P8(22)]
102920arrow icon F 215021 4 0 PMID:31447097 [P9]; PMID:37419334 [P9(22)]
102921arrow icon M 215022 2 0 PMID:31447097 [P10]
102922arrow icon F 215023 2 0 PMID:31447097 [P11]
102923arrow icon F 215024 2 0 PMID:31447097 [P12]
102924arrow icon M 215025 4 0 PMID:31447097 [P13]
102925arrow icon M 215026 3 0 PMID:31447097 [P14]; PMID:37419334 [P14(22)]
102926arrow icon M 215027 2 0 PMID:31447097 [P15(II.1)]; PMID:37419334 [P15(22)]
102927arrow icon M 215028 1 0 PMID:31447097 [P16]; PMID:37419334 [P16(22)]
102928arrow icon M 215029 2 0 PMID:31447097 [P17]
102929arrow icon F 215030 1 0 PMID:31447097 [P18]; PMID:37419334 [P18(22)]
102930arrow icon F 215031 4 0 PMID:31447097 [P19]; PMID:37419334 [P19(22)]
102931arrow icon F 215032 1 0 PMID:31447097 [P20]; PMID:37419334 [P20(22)]
102932arrow icon M 215033 2 0 PMID:31447097 [P21]; PMID:37419334 [P21(22)]
102933arrow icon M 215034 2 0 PMID:31447097 [P22]; PMID:37419334 [P22(22)]
102934arrow icon F 215035tree icon 9 0 Definitive Belarus Caucasian PMID:31447097 [P23]; PMID:33464451 [P14(III.1)]; PMID:37419334 [P23(22)]
102935arrow icon M 215035tree icon 3 0 Definitive Belarus Caucasian PMID:31447097 [P24]; PMID:33464451 [Fam.P14:III.2(P15)]; PMID:37419334 [P15(27)]
102936arrow icon M 215037 4 0 PMID:31447097 [P25]; PMID:37419334 [P25(22)]
102937arrow icon F 215038 22 PMID:31447097 [P26]
102938arrow icon F 215013 30 PMID:31447097 [Fam.P2:I.1(P27)]
102939arrow icon F 215027 30 PMID:31447097 [Fam.P15:I.1(P28)]
102940arrow icon M 215039 29 Italy Italian PMID:31447097 [P31]; PMID:37419334 [P31(22)]
102941arrow icon F 215040 38 Italy Italian PMID:31447097 [P32]; PMID:37419334 [P32(22)]
102942arrow icon F 215041 39 Italy Italian PMID:31447097 [P33]; PMID:37419334 [P33(22)]
102943arrow icon F 215042 40 Italy Italian PMID:31447097 [P34]; PMID:37419334 [P34(22)]
102944arrow icon F 215043 41 Italy Italian PMID:31447097 [P35]; PMID:37419334 [P35(22)]
102945arrow icon F 215044 42 Italy Italian PMID:31447097 [P36]; PMID:37419334 [P36(22)]
102946arrow icon F 215045 45 Italy Italian PMID:31447097 [P37]; PMID:37419334 [P37(22)]
102947arrow icon F 215046 48 Italy Italian PMID:31447097 [P38]; PMID:37419334 [P38(22)]
102948arrow icon F 215047 53 Italy Italian PMID:31447097 [P39]; PMID:37419334 [P39(22)]
102949arrow icon M 215048 55 Italy Italian PMID:31447097 [P40]; PMID:37419334 [P40(22)]
102950arrow icon M 215049 57 Italy Italian PMID:31447097 [P41]; PMID:37419334 [P41(22)]
102951arrow icon M 215050 58 Italy Italian PMID:31447097 [P42]; PMID:37419334 [P42(22)]
102952arrow icon F 215051 59 Italy Italian PMID:31447097 [P43]; PMID:37419334 [P43(22)]
102953arrow icon F 215052 59 Italy Italian PMID:31447097 [P44]; PMID:37419334 [P44(22)]
102954arrow icon M 215053 60 Italy Italian PMID:31447097 [P45]; PMID:37419334 [P45(22)]
102955arrow icon M 215054 62 Italy Italian PMID:31447097 [P46]; PMID:37419334 [P46(22)]
102956arrow icon F 215055 69 Italy Italian PMID:31447097 [P47]; PMID:37419334 [P47(22)]
102957arrow icon F 215056 40 PMID:31447097 [P29]
102958arrow icon F 215020 40 PMID:31447097 [Fam.P8:I.1(P30)]
102968arrow icon U 215060 0 U.S.A. North American PMID:31566583 [P3]; PMID:37419334 [P3]
102969arrow icon U 215061 0 U.S.A. North American PMID:31566583 [P4]; PMID:37419334 [P4]
102970arrow icon U 215062 0 U.S.A. North American PMID:31566583 [P5]; PMID:37419334 [P5]
102971arrow icon U 215063 0 U.S.A. North American PMID:31566583 [P6]; PMID:37419334 [P6]
102972arrow icon U 215064 0 U.S.A. North American PMID:31566583 [P7]; PMID:37419334 [P7]
102973arrow icon U 215065 0 U.S.A. North American PMID:31566583 [P8]; PMID:37419334 [P8]
102974arrow icon U 215066 0 U.S.A. North American PMID:31566583 [P9]; PMID:37419334 [P9]
102975arrow icon U 215067 0 U.S.A. North American PMID:31566583 [P10]; PMID:37419334 [P10]
102976arrow icon U 215068 0 U.S.A. North American PMID:31566583 [P11]; PMID:37419334 [P11]
102977arrow icon U 215069 0 U.S.A. North American PMID:31566583 [P12]; PMID:37419334 [P12]
102978arrow icon U 215070 0 U.S.A. North American PMID:31566583 [P13]; PMID:37419334 [P13]
102979arrow icon U 215071 0 U.S.A. North American PMID:31566583 [P14]; PMID:37419334 [P14]
102980arrow icon U 215072 0 U.S.A. North American PMID:31566583 [P15]; PMID:37419334 [P15]
102981arrow icon U 215073 0 U.S.A. North American PMID:31566583 [P16]; PMID:37419334 [P16]
106153arrow icon F 215035tree icon 61 Definitive Belarus Caucasian PMID:33464451 [Fam.P14:I.1(P17)]; PMID:37419334 [P17(22)]
106155arrow icon M 215035tree icon 38 Definitive Belarus Caucasian PMID:33464451 [Fam.P14:II.2(P16)]; PMID:37419334 [P16(27)]
106156arrow icon M 215035tree icon 0 0 Definitive Belarus Caucasian PMID:33464451 [Fam.P14:III.3(P18)]; PMID:37419334 [P18(27)]
106332arrow icon F 215988tree icon 1 Definitive United Kingdom PMID:37419334 [P1(43)(II.2)]; PMID:34860543 [Fam.1:II.2(P1)]
106334arrow icon M 215988tree icon 30 Definitive United Kingdom PMID:37419334 [P3(43)(I.2)]; PMID:34860543 [Fam.1:I.2]
106335arrow icon F 215988tree icon 4 Definitive United Kingdom PMID:37419334 [P2(43)(II.1)]; PMID:34860543 [Fam.1:II.1]
106338arrow icon M 215991tree icon 0 Possible United Kingdom PMID:34860543 [Fam.2:II.2(P2)]
106813arrow icon U 216159 Definitive PMID:37419334 [P17]
106814arrow icon U 216160 Definitive PMID:37419334 [P18]
106815arrow icon U 216161 Definitive PMID:37419334 [P19]

AD: Age at genetic diagnosis; AFM: age at first manifestation; PMID: PubMed ID; GRID: GenIA reference ID (ref. not in PubMed).

Summary of clinical findings

[Considering only Definitive and Possible cases]

Rank Clinical term Present Absent Unreported
1 Reduced T cell countarrow icon 66 (93.0%) 2 (2.8%) 3 (4.2%)
2 Nail dystrophyarrow icon 32 (45.1%) 33 (46.5%) 6 (8.5%)
3 Lymphopeniaarrow icon 24 (33.8%) 5 (7.0%) 42 (59.2%)
4 (unusual) Respiratory tract infectionarrow icon 20 (28.2%) 30 (42.3%) 21 (29.6%)
5 Recurrent upper respiratory tract infectionarrow icon 12 (16.9%) 0 (0.0%) 59 (83.1%)
6 Eczemaarrow icon 9 (12.7%) 0 (0.0%) 62 (87.3%)
7 Carious teetharrow icon 7 (9.9%) 0 (0.0%) 64 (90.1%)
8 Lung diseasearrow icon 7 (9.9%) 2 (2.8%) 62 (87.3%)
9 Thymus aplasiaarrow icon 7 (9.9%) 0 (0.0%) 64 (90.1%)
10 Pneumoniaarrow icon 7 (9.9%) 2 (2.8%) 62 (87.3%)
11 Thymus hypoplasiaarrow icon 6 (8.5%) 1 (1.4%) 64 (90.1%)
12 Alopeciaarrow icon 6 (8.5%) 6 (8.5%) 59 (83.1%)
13 Hematopoietic stem cell transplantationarrow icon 5 (7.0%) 0 (0.0%) 66 (93.0%)
14 (unusual) Viral infectionarrow icon 5 (7.0%) 0 (0.0%) 66 (93.0%)
15 Sinusitisarrow icon 4 (5.6%) 0 (0.0%) 67 (94.4%)
16 Otitis mediaarrow icon 4 (5.6%) 0 (0.0%) 67 (94.4%)
17 Decreased lymphocyte proliferation in response to mitogensarrow icon 4 (5.6%) 8 (11.3%) 59 (83.1%)
18 Abnormally low T cell receptor excision circle levelarrow icon 4 (5.6%) 0 (0.0%) 67 (94.4%)
19 Reduced NK cell numberarrow icon 4 (5.6%) 31 (43.7%) 36 (50.7%)
20 Reduced number of B cellsarrow icon 4 (5.6%) 35 (49.3%) 32 (45.1%)
21 Enteropathyarrow icon 4 (5.6%) 3 (4.2%) 64 (90.1%)
22 Diarrheaarrow icon 4 (5.6%) 3 (4.2%) 64 (90.1%)
23 Atopic dermatitisarrow icon 3 (4.2%) 0 (0.0%) 68 (95.8%)
24 RSV bronchiolitisarrow icon 3 (4.2%) 0 (0.0%) 68 (95.8%)
25 Abnormal hair morphologyarrow icon 3 (4.2%) 10 (14.1%) 58 (81.7%)
26 Atopyarrow icon 3 (4.2%) 0 (0.0%) 68 (95.8%)
27 Failure to thrivearrow icon 3 (4.2%) 3 (4.2%) 65 (91.6%)
28 Increased NK cell numberarrow icon 3 (4.2%) 0 (0.0%) 68 (95.8%)
29 Neonatal omphalitisarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
30 Gastrointestinal inflammationarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
31 Norovirus infectionarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
32 Mucocutaneous candidiasisarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
33 Psoriasiform dermatitisarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
34 Type I diabetes mellitusarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
35 Ventricular septal defectarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
36 Autoimmunityarrow icon 2 (2.8%) 3 (4.2%) 66 (93.0%)
37 Fine hairarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
38 (Unusual) bacterial infectionarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
39 Endocrine system abnormalityarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
40 Cytomegalovirus infectionarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
41 Skin rasharrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
42 Persistent EBV viremiaarrow icon 2 (2.8%) 0 (0.0%) 69 (97.2%)
43 Dermatitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
44 Abnormal B cell proliferationarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
45 Recurrent lower respiratory tract infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
46 Recurrent viral upper respiratory tract infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
47 Eosinophiliaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
48 B-cell lymphomaarrow icon 1 (1.4%) 4 (5.6%) 66 (93.0%)
49 Thrombocytopeniaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
50 Rosaceaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
51 Malabsorptionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
52 Osteoporosisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
53 Hepatopathyarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
54 Seborrheic dermatitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
55 Intellectual disabilityarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
56 Foot polydactylyarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
57 Arnold-Chiari malformationarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
58 Tracheoesophageal fistulaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
59 Recurrent enteroviral infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
60 Viral hepatitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
61 Melanomaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
62 Pituitary adenomaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
63 Skin abnormalityarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
64 Anemiaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
65 Herpes Simplex Virus Infectionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
66 Conjunctivitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
67 Enterocolitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
68 (unusual) Epstein-Barr virus infectionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
69 Recurrent Haemophilus influenzae infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
70 Hepatitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
71 Premature birtharrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
72 Hepatitis Barrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
73 Encephalitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
74 Arrhythmiaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
75 Recurrent staphylococcal infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
76 Non-Hodgkin lymphomaarrow icon 1 (1.4%) 4 (5.6%) 66 (93.0%)
77 proteinuriaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
78 Hypogammaglobulinemiaarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
79 Bronchitisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
80 Arthritisarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
81 Salmonella infectionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
82 Molluscum contagiosumarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
83 Erythrodermaarrow icon 1 (1.4%) 4 (5.6%) 66 (93.0%)
84 Reduced proportion of CD4 T cellsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
85 Hypertensionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
86 Skin infections arrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
87 Recurrent urinary tract infectionsarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
88 Retinal vein occlusionarrow icon 1 (1.4%) 0 (0.0%) 70 (98.6%)
89 Epicanthusarrow icon 0 (0.0%) 5 (7.0%) 66 (93.0%)
90 Abnormality of the thymusarrow icon 0 (0.0%) 2 (2.8%) 69 (97.2%)
91 Unusual infectionarrow icon 0 (0.0%) 1 (1.4%) 70 (98.6%)

Summary of treatment outcomes

[Considering only Definitive and Possible cases]

Treatment ⓘ Responses & clinical indications
Acyclovir Unspecified (1) for unspecified
Intravenous immunoglobulin therapy Unspecified (2) for Hypogammaglobulinemia; unspecified
Antibiotics Unspecified (1) for unspecified
Hematopoietic stem cell transplantation Unspecified (5) for unspecified. Negative/Bad (1) for unspecified
Co-trimoxazole Unspecified (1) for unspecified
Antiviral agent Unspecified (1) for unspecified