Information on IFNAR1

Basic details

Alt. symbols: IFNAR | IFRC

Approved name: interferon alpha and beta receptor subunit 1
Alt. names: interferon (alpha, beta and omega) receptor 1 | IFNalpha/beta receptor 1, type I interferon receptor 1, interferon alpha/beta receptor 1

Location: 21q22.11: 33324387 - 33359864 (+)
Gene type: protein_coding, 29 transcripts.

Scores: LoFtool: 0.696000 | pLI: 0.00062033 | LOEUF: 1.211

HGNC: 5432

NCBI: 3454, RefSeq: .0

Ensembl: ENSG00000142166.15

LRG_ | Status: none

OMIM: 107450

Expression | ProteinAtlas

Normal function

The IFNAR1 protein is a subunit of the type I interferon receptor complex, which also includes another subunit known as IFNAR2. IFNAR1 binds to type I interferons, which include interferon-alpha (IFN-alpha) and interferon-beta (IFN-beta). These interferons are the cytokines that are produced in response to various stimuli, such as viral infections, and play a key role in the body's antiviral defense mechanisms. Upon binding to the interferons, the IFNAR1/IFNAR2 complex activates a signaling pathway inside the cell that leads to the production of proteins with antiviral, antiproliferative, and immune system modulating effects. This includes the activation of genes that encode antiviral proteins and proteins that regulate cell growth and the immune response. In addition to its role in the immune response, IFNAR1 is also involved in other cellular processes. For example, it has been implicated in the regulation of cell survival and apoptosis, and it may also play a role in the development and function of the nervous system.

Dysfunction and disease

Biallelic loss-of-function (truncating) mutations in the IFNAR1 gene leading to dysfunction or deficiency of the IFNAR1 protein have been associated with a condition mainly characterized by increased susceptibility to viral infections or by more severe rections to viral infections, namely immunodeficiency 106 (MIM#619935). Almost 10 distinct mutations have been reported thus far. Deficiency of IFNAR1 results in impaired signaling of type I interferons, which are crucial for the immune response a gainst viral infections. As a result, patients are more susceptible to severe to viral infections, including COVID-19. A digenic condition was also reported in a Saudi boy from a consanguineous family with disseminated Mycobacterium abscessus, S. viridians bacteremia, and CMV viremia, who carried both a homozygous frameshift deletion in IFNGR2 (C266fs) and a homozygous deletion in IFNAR1 (c.*557GlueExt*46) (PMID: 29106381). [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2023-07-18 12:07:31]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IMD106 Immunodeficiency 106 ARdict. icon 619935www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of IFNAR1

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
204 ENST00000652450.2 protein_coding 11 No 1962 NM_001384502,NM_001384504
201 ENST00000270139.8 CCDS13624 Select protein_coding 11 Yes 6075 NM_000629,NM_001384498,NM_001384499
211 ENST00000700084.1 protein_coding No NM_001384500
221 ENST00000703557.1 protein_coding No NM_001384501,NM_001384503

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
2017Di-/oligo-genic inheritance29106381Authors report a patient from a consanguineous family with disseminated Mycobacterium abscessus, S. viridians bacteremia, and CMV viremia, who carry a homozygous frameshift deletion in IFNGR2 (C266fs) and a homozygous deletion in IFNAR1 (c.*557GlueExt*46).
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in IFNAR1

ID Year Title Journal PMID Variants

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