Information on IKBKB
Basic details
Alt. symbols: IKK2 | NFKBIKB | IKK-beta | IKKB
Approved name: inhibitor of nuclear factor kappa B kinase subunit beta
Alt. names: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
Location: 8p11.21: 42271302 - 42332460 (+)
Gene type: protein_coding, 33 transcripts.
Scores: LoFtool: 0.698000 | pLI: 0.99878670 | LOEUF: 0.290
Normal function
IKBKB is a serine kinase that plays an essential role in the NF-kappa-B signalling pathway, which is activated by multiple stimuli such as inflammatory cytokines, bacterial or viral products, DNA damage or other cellular stress (PubMed:30337470). IKBKB acts as part of the canonical IKK complex in the conventional pathway of NF-kappa-B activation.
Dysfunction and disease
Biallelic nonsense or insertion mutations in IKBKB leading to a loss of IKK2 protein expression result in severe combined immunodeficiency (SCID): Immunodeficiency 15B [MIM:615592]; whereas monoallelic gain-of-function mutations, such as the p.Val203Ile (Cardinez et al. 2018, PMID:30337470), can cause a less severe form combined immune deficiency, namely Immunodeficiency 15A [MIM:618204]. The p.Val203Ile variant is the only GOF variant known to date, and it was found in four cases from two unrel ated families. [Load More]
[Reviewed by Andrés Caballero-Oteyza on 2024-03-19 11:04:28]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of IKBKB
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
215 | ENST00000520655.5 | nonsense_mediated_decay | No | 3777 | XM_047421764 | ||||
217 | ENST00000520835.7 | protein_coding | 21 | No | 2406 | NM_001190720 | |||
216 | ENST00000520810.6 | 1 | CCDS6128 | Select | protein_coding | 22 | Yes | 3938 | NM_001242778,NM_001556 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in IKBKB
ID | Year | Title | Journal | PMID | Variants |
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