Information on IKBKB

Basic details

Alt. symbols: IKK2 | NFKBIKB | IKK-beta | IKKB

Approved name: inhibitor of nuclear factor kappa B kinase subunit beta
Alt. names: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta

Location: 8p11.21: 42271302 - 42332460 (+)
Gene type: protein_coding, 33 transcripts.

Scores: LoFtool: 0.698000 | pLI: 0.99878670 | LOEUF: 0.290

HGNC: 5960

NCBI: 3551, RefSeq: NG_041793.1

Ensembl: ENSG00000104365.16

LRG_1241 | Status: public

OMIM: 603258

Expression | ProteinAtlas

Normal function

IKBKB is a serine kinase that plays an essential role in the NF-kappa-B signalling pathway, which is activated by multiple stimuli such as inflammatory cytokines, bacterial or viral products, DNA damage or other cellular stress (PubMed:30337470). IKBKB acts as part of the canonical IKK complex in the conventional pathway of NF-kappa-B activation.

Dysfunction and disease

Biallelic nonsense or insertion mutations in IKBKB leading to a loss of IKK2 protein expression result in severe combined immunodeficiency (SCID): Immunodeficiency 15B [MIM:615592]; whereas monoallelic gain-of-function mutations, such as the p.Val203Ile (Cardinez et al. 2018, PMID:30337470), can cause a less severe form combined immune deficiency, namely Immunodeficiency 15A [MIM:618204]. The p.Val203Ile variant is the only GOF variant known to date, and it was found in four cases from two unrel ated families. [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2024-03-19 11:04:28]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IMD15A Immunodeficiency 15A ADdict. icon Gain of Function 618204www icon 0 (0 fams)
IMD15B Immunodeficiency 15B ARdict. icon Loss of Function 615592www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of IKBKB

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
215 ENST00000520655.5 nonsense_mediated_decay No 3777 XM_047421764
217 ENST00000520835.7 protein_coding 21 No 2406 NM_001190720
216 ENST00000520810.6 1 CCDS6128 Select protein_coding 22 Yes 3938 NM_001242778,NM_001556

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in IKBKB

ID Year Title Journal PMID Variants

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