Information on IKZF3

Basic details

Alt. symbols: ZNFN1A3 | Aiolos

Approved name: IKAROS family zinc finger 3
Alt. names: zinc finger protein, subfamily 1A, 3 (Aiolos), IKAROS family zinc finger 3 (Aiolos)

Location: 17q21.1: 39757715 - 39864312 (-)
Gene type: protein_coding, 17 transcripts.

Scores: LoFtool: 0.116000 | pLI: 0.99492179 | LOEUF: 0.294

HGNC: 13178

NCBI: 22806, RefSeq: NG_029104.2

Ensembl: ENSG00000161405.18

LRG_ | Status: none

OMIM: 606221

Expression | ProteinAtlas

Normal function

This gene encodes a protein known as Aiolos that belongs to the ikaros family of transcription factors. There are three members of this family (Ikaros, Aiolos and Helios) that support lymphocyte development; in particular, Aiolos is important in the maturation and proliferation of B-cells. Their mode of action is not yet clear, however, this protein may influence chromatin remodeling and participate in multimerization. Aiolos seems to be involved in regulating BCL2 expression and controlling apoptosis in T-cells in an IL2-dependent manner.

Dysfunction and disease

Yamashita et al. (2021, PMID:34155405) and Kuehn et al. (2021, PMID:34694366) recently reported two families carrying a novel missense mutation in AIOLOS (p.N160S), which is equivalent to the previously known p.N159S mutation in IKAROS. The patients presented with recurrent respiratory infections including PJP, hypogammaglobulinemia, low number of memory B cells and failure to thrive. In vitro studies suggested a dominant negative effect of the AIOLOS-N160S mutant over AIOLOS-WT for DNA binding when overexpressed together. This mutation also seems to lead to abnormal B-cell proliferation, and abnormal B- and T-cell differentiation. Affected carriers also displayed increased numbers of CD21 low cells. More recently, additional individuals with LOF variants leading to AIOLOS haploinsufficiency have been described (2024, PMID:38015619) [Load More]

[Reviewed by Xiao P. Peng on 2022-07-10 08:29:21]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IMD84 Immunodeficiency 84 ADdict. icon Negative Dominance 619437www icon 8 (7 fams)
IMD84b Immunodeficiency 84b ADdict. icon Haploinsufficiency - 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not been completed yet. It is currently ongoing.

Transcripts of IKZF3

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
213 ENST00000439167.6 CCDS58539 protein_coding 6 No 1879 NM_001257409
208 ENST00000377945.7 CCDS58545 protein_coding 5 No 1696 NM_001257414
216 ENST00000583368.1 CCDS74055 protein_coding 3 No 1456 NM_001284516
205 ENST00000350532.7 CCDS11349 protein_coding 7 No 1413 NM_183230
207 ENST00000377944.7 CCDS58543 protein_coding 6 No 1669 NM_001257411
212 ENST00000439016.2 CCDS11350 protein_coding 6 No 1246 NM_183231
215 ENST00000535189.5 CCDS58540 protein_coding 7 No 1996 NM_001257408
211 ENST00000394189.6 CCDS58542 protein_coding 5 No 1552 NM_001257412
209 ENST00000377952.6 CCDS58541 protein_coding 4 No 1435 NM_001257413
206 ENST00000351680.7 CCDS11348 protein_coding 7 No 1413 NM_183229
203 ENST00000346872.8 CCDS11346 Select protein_coding 8 Yes 9788 NM_012481
210 ENST00000377958.7 CCDS58544 protein_coding 7 No 1837 NM_001257410
214 ENST00000467757.5 CCDS11347 protein_coding 7 No 1362 NM_183228
202 ENST00000346243.7 CCDS11351 protein_coding 6 No 1296 NM_183232
217 ENST00000623724.3 CCDS74055 protein_coding 9 No 9787 NM_001284514,NM_001284515

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not been completed yet. It is currently ongoing.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in IKZF3

ID Year Title Journal PMID Variants

Phenotypic & functional assays available?

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