Information on IRF7

Basic details

Alt. symbols: IMD39 | IRF7H | IRF7A | IRF7B | IRF7C

Approved name: interferon regulatory factor 7
Alt. names: interferon regulatory factor 7 | IRF7 | interferon regulatory factor 7G isoform | interferon regulatory factor7H

Location: 11p15.5: 612553 - 615983 (-)
Gene type: protein_coding, 17 transcripts.

Scores: LoFtool: 0.095300 | pLI: 0.00000033 | LOEUF: 1.568

HGNC: 6122

NCBI: 3665, RefSeq: NG_029106.1

Ensembl: ENSG00000185507.21

LRG_1313 | Status: public

OMIM: 605047

Expression | ProteinAtlas

Normal function

IRF7 encodes a transcriptional regulator that plays critical role in the innate immune response against DNA and RNA viruses. IRF7 is required during both the early and late phases of IFN gene induction but is more critical for the late than for the early phase. It exists in an inactive form in the cytoplasm of uninfected cells and can be activated by viral infection, double-stranded RNA (dsRNA), or toll-like receptor (TLR) signaling. This leads to phosphorylation by IKBKE and TBK1 kinases, which induces a conformational change, leading to its dimerization and nuclear localization where, along with other coactivators, it can activate transcription of type I IFN genes (IFN-alpha and IFN-beta) and IFN-stimulated genes (ISG) by binding to an interferon-stimulated response element (ISRE) in their promoters (PMID:17574024, 32972995). It can also induce transcription of ubiquitin hydrolase USP25 mRNA in response to lipopolysaccharide (LPS) or viral infection in a type I IFN-dependent manner. IRF7 also plays a role in regulating adaptive immune responses by inducing PSMB9/LMP2 expression, either directly or through induction of IRF1. It may also play roles in regulating EBV latency and the anti-tumor properties of primary macrophages (PMID: 11073981, 12374802, 15361868, 17404045).

Dysfunction and disease

Biallelic missense and nonsense mutations in IRF7 have been associated with autosomal recessive Immunodeficiency 39 [MIM:616345] featuring defective type I and III interferon (IFN) production and impaired IFN-mediated responses to influenzavirus infection. This has been described to cause life-threatening influenza infections in an otherwise healthy female child and male adult (PMID: 25814066, 31172279). [Load More]

[Reviewed by Xiao P. Peng on 2021-07-12 13:04:39]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IMD39 Immunodeficiency 39 ARdict. icon 616345www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of IRF7

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000330243.9 CCDS7705 protein_coding 10 No 1992 NM_004031
204 ENST00000397570.5 protein_coding 8 No 1943 XM_005252909
206 ENST00000525445.6 1 CCDS7703 Select protein_coding 11 Yes 1923 NM_001572
202 ENST00000348655.11 CCDS7704 protein_coding 10 No 1807 NM_004029

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in IRF7

ID Year Title Journal PMID Variants

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