Information on IRF8
Basic details
Alt. symbols: ICSBP1 | IRF-8 | ICSBP
Approved name: interferon regulatory factor 8
Alt. names: interferon consensus sequence binding protein 1
Location: 16q24.1: 85899116 - 85922606 (+)
Gene type: protein_coding, 18 transcripts.
Scores: LoFtool: 0.174000 | pLI: 0.92654024 | LOEUF: 0.344
Normal function
Dysfunction and disease
Immunodeficiency 32A, mycobacteriosis, autosomal dominant [MIM:614893] | Immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive [MIM:226990]. Monoallelic or biallelic mutations in IRF8 have been shown to cause respectively autosomal dominant (Immunodeficiency 32A, mycobacteriosis, autosomal dominant OMIM: 614893) or autosomal recessive (Immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive OMIM: 226990) immunodeficiency. Autosomal dominant I RF8 deficiency, or IMD32A, causes an abnormal peripheral blood myeloid phenotype with a marked loss of CD11C (ITGAX; 151510)-positive/CD1C (188340) dendritic cells, resulting in selective susceptibility to mycobacterial infections (Hambleton et al., 2011). Immunodeficiency-32B is an autosomal recessive primary immunodeficiency characterized by recurrent infections resulting from variable defects in immune cell development or function, including monocytes, dendritic cells, and natural killer (NK) cells. Patients have particular susceptibility to viral disease (summary by Mace et al., 2017). [Load More]
[Gene NOT reviewed yet]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of IRF8
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
210 | ENST00000569607.2 | protein_coding | No | 880 | NM_001363908 | ||||
206 | ENST00000564803.6 | protein_coding | No | 1038 | NM_001363907 | ||||
201 | ENST00000268638.10 | 1 | CCDS10956 | Select | protein_coding | 9 | Yes | 2668 | NM_002163 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in IRF8
ID | Year | Title | Journal | PMID | Variants |
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