Information on ISG15
Basic details
Alt. symbols: G1P2 | IFI15 | UCRP
Approved name: ISG15 ubiquitin like modifier
Alt. names: interferon, alpha-inducible protein (clone IFI-15K)
Location: 1p36.33: 1001138 - 1014540 (+)
Gene type: protein_coding, 3 transcripts.
Scores: LoFtool: 0.501000 | pLI: 0.00984781 | LOEUF: 1.691
Normal function
ISG15 is a small ubiquitin-like protein strongly induced by type I IFNs (PMID: 1373138), viral (PMID: 11157743) and bacterial infections (PMID: 26259872), LPS (PMID: 11854279) and retinoic acid (PMID: 14976209). ISG15 can be covalently conjugated onto target host and viral proteins via a 3-step enzymatic cascade, though the purpose of this ISGylation is still largely unknown (PMID: 29769653). ISGylation does not appear to directly target proteins for proteasome-mediated degradation, but ISG15 can compete with ubiquitin for ubiquitin binding sites on a protein, thereby indirectly regulating protein degradation (PMID: 16424026, 12426315). In addition, unconjugated ISG15 has been reported to function as a cytokine, with roles in the induction of natural killer (NK) cell proliferation (PMID: 8552607), dendritic cell maturation (PMID: 12067988), and IFN production, and serving as a chemotactic factor for neutrophils (PMID: 12963022).
Dysfunction and disease
Patients with biallelic nonsense or frameshift mutations in ISG15, resulting in absent protein, present with a type I IFNopathy associated with autoimmunity and MSMD (Mendelian susceptibility to mycobacterial disease) [OMIM: 616126]. The initially identified 3 patients developed severe disseminated Mycobacterial disease in response to BCG vaccination and were retrospectively found to have intracranial calcifications on neuroimaging (PMID: 22859821), while an additional 3 siblings from a Chinese family showed idiopathic basal ganglia calcifications and variable seizure activity without evidence of MSMD (did not receive BCG vaccines) or other infection susceptibilities (PMID: 25307056). Patients showed constitutive and strongly upregulated peripheral blood ISGs and the 3 patients with epileptic activity also had autoantibody levels higher than seen in age-matched controls. Zhang et al. (2015) showed that the absence of ISG15 essentially created a functional defect in USP18, a potent negative regulator of IFN-α/β signaling, and that failure of intracellular USP18 accumulation in patient cells resulted in their enhanced and amplified IFN-α/β signaling (PMID: 25307056). [Load More]
[Reviewed by Xiao P. Peng on 2022-06-24 11:11:26]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of ISG15
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
203 | ENST00000649529.1 | 1 | CCDS6 | Select | protein_coding | 2 | Yes | 637 | NM_005101 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in ISG15
ID | Year | Title | Journal | PMID | Variants |
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