Information on MCM4

Basic details

Alt. symbols: CDC21 | CDC54 | hCdc21 | P1-Cdc21 | MGC33310

Approved name: minichromosome maintenance complex component 4
Alt. names: MCM4 minichromosome maintenance deficient 4 (S. cerevisiae) | DNA replication licensing factor MCM4

Location: 8q11.21: 47960185 - 47978160 (+)
Gene type: protein_coding, 28 transcripts.

Scores: LoFtool: 0.813000 | pLI: 0.00030184 | LOEUF: 0.552

HGNC: 6947

NCBI: 4173, RefSeq: NG_032967.1

Ensembl: ENSG00000104738.19

LRG_1239 | Status: public

OMIM: 602638

Expression | ProteinAtlas

Normal function

The protein encoded by MCM4 is one of the highly conserved mini-chromosome maintenance proteins (MCM) that are essential for the initiation of eukaryotic genome replication. The hexameric protein complex formed by MCM proteins is a key component of the pre-replication complex (pre_RC) and may be involved in the formation of replication forks and in the recruitment of other DNA replication related proteins. The MCM complex consisting of this protein and MCM2, 6 and 7 proteins possesses DNA helicase activity, and may act as a DNA unwinding enzyme. The phosphorylation of this protein by CDC2 kinase reduces the DNA helicase activity and chromatin binding of the MCM complex. This gene is mapped to a region on the chromosome 8 head-to-head next to the PRKDC/DNA-PK, a DNA-activated protein kinase involved in the repair of DNA double-strand breaks.

Dysfunction and disease

Mutations in MCM4 have been shown to cause an autosomal recessive form of primary immunodeficiency (Immunodeficiency 54 [MIM:609981]), which is characterized by severe intra- and extrauterine growth retardation, microcephaly, decreased numbers of natural killer (NK) cells, and recurrent viral infections, most often affecting the respiratory tract and leading to respiratory failure. Affected individuals also have adrenal insufficiency requiring corticosteroid replacement therapy and may have an i ncreased susceptibility to cancer. In vitro studies in patient-derived cells showed a DNA repair defect. There are at least 8 unrelated kindreds reported from 3 different studies (Hughes et al. 2012; Gineau et al. 2012; Casey et al. 2020). However, only 2 pathogenic mutations are described, both of them alter mRNA splicing: c.71-2A>G and c.70_71insG. [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2020-06-09 13:49:03]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IMD54 Immunodeficiency 54 ARdict. icon Loss of Function 609981www icon 20 (7 fams)

Transcripts of MCM4

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
222 ENST00000649973.1 1 CCDS6143 Select protein_coding 17 Yes 4062 NM_182746
201 ENST00000262105.6 CCDS6143 protein_coding 16 No 4183 NM_005914

Published variants

Found 1 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients
EX3-2A>G IN2 c.71-2A>G p.(Phe24ArgfsTer4) ALTERS SPLICING! Pathogenic 20

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in MCM4

ID Year Title Journal PMID Variants
675 2012 Recessive mutations in MCM4/PRKDC cause a novel syndrome inv... J. Med. Genet 22499342 1
677 2012 MCM4 mutation causes adrenal failure, short stature, and nat... J. Clin. Investig. 22354170 1
678 2012 Partial MCM4 deficiency in patients with growth retardation,... J. Clin. Investig. 22354167 1

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