Information on NLRP12
Alt. symbols: NALP12 | RNO2 | PYPAF7 | Monarch1 | PAN6 | CLR19.3
Approved name: NLR family pyrin domain containing 12
Alt. names: NACHT, leucine rich repeat and PYD containing 12 | nucleotide-binding oligomerization domain, leucine rich repeat and pyrin domain containing 12
Location: 19q13.42: 53792139 - 53824403 (-)
Gene type: protein_coding, 6 transcripts.
Scores: LoFtool: 0.275000 | pLI: 0.00000000 | LOEUF: 1.355
Gene Ontology (GO)
- Molecular function:
- Cell component: cytoplasm [GO:0005737]
- Biological process: negative regulation of canonical NF-kappaB signal transduction [GO:0043124]; negative regulation of inflammatory response [GO:0050728]; cellular response to cytokine stimulus [GO:0071345]; positive regulation of MHC class I biosynthetic process [GO:0045345]
Normal function
The NLRP12 gene encodes the protein monarch-1, a member of a family of proteins called nucleotide-binding domain and leucine-rich repeat containing (NLR) proteins, which are mainly found in the cytoplasm of certain types of leukocytes. NLR proteins help to regulate the immune system's response to injury, toxins, or invasion by microorganisms. Unlike most NLR proteins that promote increased activity by the immune system, monarch-1 inhibits the release of certain cytokines that are involved in the process of inflammation.
Dysfunction and disease
Heterozygous loss-of-function (LOF) mutations in NLRP12 have been associated with Familial cold autoinflammatory syndrome 2 (FCAS2) [OMIM: 611762], an extremely rare AD inherited disorder mainly characterized by recurrent episodes of fever and inflammation. The first reported patients suffered from arthralgia, periodic fever, and cold-induced urticaria, with spontaneous improvement during adolescence and functional studies demonstrating that their variants exerted a deleterious effect on NF-kapp aB signaling (PMID: 18230725). Since then, additional nonsense and missense NLRP12 variants have been identified in individuals with periodic fever syndromes, cold-induced autoinflammatory disease and even common variable immunodeficiency (CVID). It has been proposed that these latter mutations do not impair NF-kappaB activation so much as trigger speck formation and activation of caspase 1 signaling, but a unifying understanding of NLRP12-related pathogenesis remains elusive. [Load More]
[Reviewed by Xiao P. Peng on 2022-06-21]
Associated conditions
Please mind that curation (inclusion of all reported patients) of this gene has not been completed. It is currently ongoing.
Transcripts of NLRP12
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
204 | ENST00000391773.8 | 2 | CCDS62785 | protein_coding | 10 | No | 3635 | NM_001277126 | |
202 | ENST00000345770.9 | protein_coding | 9 | No | 3547 | XM_047439674 | |||
201 | ENST00000324134.11 | 1 | CCDS12864 | Select | protein_coding | 10 | Yes | 3634 | NM_144687 |
205 | ENST00000391775.7 | CCDS62784 | protein_coding | 9 | No | 3465 | NM_001277129 |
Published variants
Found 3 variants
Please mind that curation (inclusion of all reported gene variants) has not been completed. It is currently ongoing.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in NLRP12
Please mind that curation (inclusion of all relevant literature) has not been completed. It is currently ongoing.