Information on ACP5

Basic details

Alt. symbols: TRAP | HPAP

Approved name: acid phosphatase 5, tartrate resistant
Alt. names: tartrate-resistant acid phosphatase, human purple acid phosphatase

Location: 19p13.2: 11574653 - 11579993 (-)
Gene type: protein_coding, 27 transcripts.

Scores: LoFtool: 0.138000 | pLI: 0.12356835 | LOEUF: 0.724

HGNC: 124

NCBI: 54, RefSeq: NG_028127.1

Ensembl: ENSG00000102575.14

LRG_1218 | Status: public

OMIM: 171640

Expression | ProteinAtlas

Normal function

ACP5 encodes tartrate-resistant acid phosphatase (TRAP), a metalloenzyme involved in osteopontin/bone sialoprotein dephosphorylation whose expression is restricted to mononuclear phagocytes (PMID: 32214327, 2338077). TRAP exists as two isoforms with different optimal pH and specific activities, derived from differential post-translational processing of a central regulatory loop peptide (PMID: 15929988). Isoform a is a monomeric protein with intact loop peptide, while isoforms 5a and 5b result from proteolytic cleavage into 23 kDa and 16 kDa disulfide-linked heterodimers that are differentially compartmentalized. In macrophages and dendritic cells, only isoform 5a is secreted from cells, making this a good marker for systemic macrophage functions and chronic inflammatory activity (PMID: 17369130). In osteoclasts, on the other hand, isoform 5b is released into circulation with other matrix products during bone resorption, making this a good marker for osteoclast activity (PMID: 15312243).

Dysfunction and disease

Biallelic mutations in ACP5 lead to Spondyloenchondrodysplasia with immune dysregulation (SPENCDI) [OMIM: 607944], an immuno-osseous dysplasia combining the typical metaphyseal and vertebral bone lesions of spondyloenchondrodysplasia (SPENCD) with immune dysfunction and neurologic involvement. The skeletal dysplasia is characterized by radiolucent and irregular spondylar and metaphyseal lesions that represent islands of chondroid tissue within bone. Vertebral bodies show dorsally accentuated pla tyspondyly with disturbance of ossification. Variable clinical findings include short stature, rhizomelic micromelia, increased lumbar lordosis, barrel chest, facial anomalies, and clumsy movements. CNS involvement includes spasticity, intellectual disability, and cerebral calcifications. Patients may show some combination of immunodeficiency, auto-inflammation and/or auto-immunity, but the clinical spectrum can vary significantly even within families. Patients show absent serum expression of TRAP, increased levels of serum IFN-alpha and upregulated interferon gene signatures (PMID: 26951490). [Load More]

[Reviewed by Xiao P. Peng on 2022-06-22 07:13:52]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
SPENCDI Spondyloenchondrodysplasia with immune dysregulation ARdict. icon Loss of Function 607944www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of ACP5

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
209 ENST00000591319.2 protein_coding No 581 NM_001322023
202 ENST00000412435.7 CCDS12265 protein_coding 6 No 1527 NM_001111036
201 ENST00000218758.10 CCDS12265 protein_coding 7 No 1630 NM_001111035
212 ENST00000648477.1 1 CCDS12265 Select protein_coding 5 Yes 1381 NM_001611
211 ENST00000592828.7 protein_coding No 560 XM_005259938
213 ENST00000649386.2 protein_coding No 558 XM_011528069
213 ENST00000695791.1 protein_coding No NM_001111034
216 ENST00000695811.1 protein_coding No XM_047438944

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in ACP5

ID Year Title Journal PMID Variants

Phenotypic & functional assays available?

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