Information on BLNK

Basic details

Alt. symbols: SLP65 | Ly57 | SLP-65 | BLNK-s | BASH | bca

Approved name: B cell linker
Alt. names: B-cell adapter containing a SH2 domain protein, B-cell activation, Src homology [SH2] domain-containing leukocyte protein of 65 kD, B cell adaptor containing SH2 domain

Location: 10q24.1: 96189171 - 96271587 (-)
Gene type: protein_coding, 25 transcripts.

Scores: LoFtool: 0.056500 | pLI: 0.99001110 | LOEUF: 0.391

HGNC: 14211

NCBI: 29760, RefSeq: NG_007575.1

Ensembl: ENSG00000095585.18

LRG_21 | Status: public

OMIM: 604515

Expression | ProteinAtlas

Normal function

The BLNK gene encodes a B-cell linker or adaptor protein that plays a critical role in B cell development. Linker or adaptor proteins provide mechanisms by which receptors can amplify and regulate downstream effector proteins. BLNK is essential for normal B-cell development (Fu et al., 1998) because it bridges B cell receptor-associated kinase activation with downstream signalling pathways. The phosphorylation of five tyrosine residues is necessary for this protein to nucleate distinct signalling effectors following B cell receptor activation.

Dysfunction and disease

Biallic mutations in BLNK have been associated with Agammaglobulinemia 4 [MIM:613502]. Homozygous splice defects in the cytoplasmic adapter protein BLNK (B cell linker protein) have been identified in patients with this type of agammaglobulinemia (no pre-B cells and no mature B cells), indicating that BLNK plays a critical role in orchestrating the pro-B cell to pre-B cell transition. Deficiency in this protein has also been shown in some cases of pre-B acute lymphoblastic leukemia. [Load More]

[Reviewed by Andrés Caballero-Oteyza on ]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AGM4 Agammaglobulinemia 4 ARdict. icon Loss of Function 613502www icon 2 (1 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not been completed yet. It is currently ongoing.

Transcripts of BLNK

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
204 ENST00000427367.6 CCDS73171 protein_coding 14 No 1284 NM_001258442
201 ENST00000224337.10 1 CCDS7446 Select protein_coding 17 Yes 4344 NM_013314
203 ENST00000413476.6 CCDS58091 protein_coding 16 No 1599 NM_001258440
202 ENST00000371176.7 CCDS44464 protein_coding 16 No 1715 NM_001114094
211 ENST00000696253.1 protein_coding No NM_001258441

Published variants

Found 4 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients
R282* EX12 1015 c.844C>T p.Arg282Ter stop_gained Pathogenic 0
EK145-146D* EX6 606-607 c.435_436delinsT p.Glu145AspfsTer12 frameshift_variant Pathogenic 2
R123* EX6 538 c.367C>T p.Arg123Ter stop_gained Pathogenic 0
EX1+3A>T IN1 c.47+3A>T splice_region_variant Pathogenic 0

Please mind that full curation (inclusion of all published variants) of this gene has not been completed yet. It is currently ongoing.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in BLNK

ID Year Title Journal PMID Variants
78 2015 Enteroviral Infection in a Patient with BLNK Adaptor Protein... JoCI 25893637 1
81 2009 Primary B cell immunodeficiencies: comparisons and contrasts... Annu. Rev. Immunol 19302039 1
82 1999 An essential role for BLNK in human B cell development... Science 10583958 1
83 2014 The BLNK adaptor protein has a nonredundant role in human B-... JACI 24582315 1

Phenotypic & functional assays available?

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