Information on BLNK
Basic details
Alt. symbols: SLP65 | Ly57 | SLP-65 | BLNK-s | BASH | bca
Approved name: B cell linker
Alt. names: B-cell adapter containing a SH2 domain protein, B-cell activation, Src homology [SH2] domain-containing leukocyte protein of 65 kD, B cell adaptor containing SH2 domain
Location: 10q24.1: 96189171 - 96271587 (-)
Gene type: protein_coding, 25 transcripts.
Scores: LoFtool: 0.056500 | pLI: 0.99001110 | LOEUF: 0.391
Normal function
The BLNK gene encodes a B-cell linker or adaptor protein that plays a critical role in B cell development. Linker or adaptor proteins provide mechanisms by which receptors can amplify and regulate downstream effector proteins. BLNK is essential for normal B-cell development (Fu et al., 1998) because it bridges B cell receptor-associated kinase activation with downstream signalling pathways. The phosphorylation of five tyrosine residues is necessary for this protein to nucleate distinct signalling effectors following B cell receptor activation.
Dysfunction and disease
Biallic mutations in BLNK have been associated with Agammaglobulinemia 4 [MIM:613502]. Homozygous splice defects in the cytoplasmic adapter protein BLNK (B cell linker protein) have been identified in patients with this type of agammaglobulinemia (no pre-B cells and no mature B cells), indicating that BLNK plays a critical role in orchestrating the pro-B cell to pre-B cell transition. Deficiency in this protein has also been shown in some cases of pre-B acute lymphoblastic leukemia. [Load More]
[Reviewed by Andrés Caballero-Oteyza on ]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not been completed yet. It is currently ongoing.
Transcripts of BLNK
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
204 | ENST00000427367.6 | CCDS73171 | protein_coding | 14 | No | 1284 | NM_001258442 | ||
201 | ENST00000224337.10 | 1 | CCDS7446 | Select | protein_coding | 17 | Yes | 4344 | NM_013314 |
203 | ENST00000413476.6 | CCDS58091 | protein_coding | 16 | No | 1599 | NM_001258440 | ||
202 | ENST00000371176.7 | CCDS44464 | protein_coding | 16 | No | 1715 | NM_001114094 | ||
211 | ENST00000696253.1 | protein_coding | No | NM_001258441 |
Published variants
Found 4 variants
Please mind that full curation (inclusion of all published variants) of this gene has not been completed yet. It is currently ongoing.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |