Information on BRCA2

Basic details

Alt. symbols: FANCD1 | FACD | FANCD | FAD | FAD1 | BRCC2 | XRCC11

Approved name: BRCA2 DNA repair associated
Alt. names: Fanconi anemia, complementation group D1, breast cancer 2, early onset, breast cancer 2 | BRCA1/BRCA2-containing complex, subunit 2

Location: 13q13.1: 32315086 - 32400268 (+)
Gene type: protein_coding, 19 transcripts.

Scores: LoFtool: 0.089600 | pLI: 0.00000000 | LOEUF: 0.635

HGNC: 1101

NCBI: 675, RefSeq: NG_012772.3

Ensembl: ENSG00000139618.19

LRG_293 | Status: public

OMIM: 600185

Expression | ProteinAtlas

Normal function

The BRCA2 gene is located on chromosome 13q and consists of 26 coding exons which code for a protein of 3,418 amino acids. There are eight copies of 30 to 80 amino acid repeats (the BRC motif) in the central third of the protein. These regions mediate binding to the RAD51 recombinase, which functions in DNA repair. The breast cancer type 2 susceptibility protein interacts with the RAD51 protein, a key component in homologous recombination and double-strand break repair. Through this interaction, BRCA2 regulates the availability and activity of RAD51, which coats single–strand DNA to form a nucleoprotein filament that invades and pairs with a homologous DNA duplex to initiate strand exchange. BRCA2 is involved in maintenance of genome stability, specifically the homologous recombination pathway for double-strand DNA repair, and is considered a tumor suppressor gene. Most BRCA2 pathogenic variants reported to date consist of frameshift deletions, insertions, or nonsense variants that predict premature truncation of protein transcription, consistent with the loss of function that is expected with clinically significant mutation of tumor suppressor genes. Cells lacking BRCA2 are deficient in the repair of double-strand DNA breaks, as reflected in a hypersensitivity to ionizing radiation.

Dysfunction and disease

Inherited BRCA2 pathogenic variants confer an increased lifetime risk of developing breast and ovarian cancer. In a study by Antoniou et al. (2003) based on 22 populations, the BRCA2–related risks for both, breast and ovarian cancer by age 70 were estimated to be 45% (95% CI = 33% to 54%) and 11% (95% CI = 4% to 18%), respectively. In another population-based study, the cumulative cancer risks for breast and ovarian cancer by age 70 in individuals with a germline BRCA2 pathogenic variant were r eported as 49% and 18%, respectively (Chen & Parmigiani, 2007). The contralateral breast cancer risk in BRCA2 heterozygotes is 12% within five years of the initial breast cancer diagnosis (Metcalfe et al., 2004). The relative risk for prostate cancer in males with a BRCA2 pathogenic variant is 4.6% (Breast Cancer Linkage Consortium, 1999). Although it is less well studied, the literature suggests that pancreatic cancer and melanoma risks may be elevated in families with a detected BRCA2 pathogenic variant (Breast Cancer Linkage Consortium, 1999; Hearle et al., 2003; van Asperen et al., 2005). Biallelic mutations in BRCA2 can cause Fanconi Anemia (FA-D1), characterized by congenital defects, bone marrow failure and chromosomal instability. [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2021-01-29 10:47:26]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
BRCA2 Breast-ovarian cancer, familial, susceptibility to 2 ADdict. icon 612555www icon 0 (0 fams)
PNCA2 Pancreatic cancer, susceptibility to, 2 ADdict. icon 613347www icon 0 (0 fams)
GLM3 Glioma susceptibility 3 ARdict. icon 613029www icon 0 (0 fams)
FANCD1 Fanconi anemia, complementation group D1 ARdict. icon 605724www icon 0 (0 fams)
WT1 Wilms tumor 1 ADdict. icon 194070www icon 0 (0 fams)
4707 Medulloblastoma 2 AD/ARdict. icon 155255www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of BRCA2

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000380152.8 1 CCDS9344 Select protein_coding 27 Yes 11954 NM_000059,NM_001406719,NM_001406721
204 ENST00000530893.7 protein_coding 27 No 2011 NM_001406722
ENST00000700202.2 protein_coding 27 No NM_001406720

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in BRCA2

ID Year Title Journal PMID Variants

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