Information on POLR3C
Alt. symbols: RPC62 | RPC3 | C82
Approved name: RNA polymerase III subunit C
Alt. names: polymerase (RNA) III (DNA directed) polypeptide C (62kD)
Location: 1q21.1: 145824053 - 145844402 (+)
Gene type: protein_coding, 27 transcripts.
Scores: LoFtool: 0.857000 | pLI: 0.00000866 | LOEUF: 1.030
Gene Ontology (GO)
- Molecular function:
- Cell component: RNA polymerase III complex [GO:0005666]
- Biological process:
Normal function
The gene encodes a DNA-dependent RNA polymerase that catalyzes the transcription of DNA into RNA as part of the initiation subcomplex of RNA polymerase III (POL III), which synthesizes small RNAs, such as 5S rRNA and tRNAs. POLR3C may direct, together with other members of the POL III subcomplex, binding to the TFIIIB-DNA complex via the interactions between TFIIIB and POLR3F. It plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses, as it acts as nuclear and cytosolic DNA sensor during the innate immune response. POLR3C can also sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF- Kappa-B through the RIG-I pathway. POLR3C preferentially binds single-stranded DNA (ssDNA) in a sequence-independent manner.
Dysfunction and disease
To date, only 3 missense variants in POLR3C have been associated with disease in 3 unrelated kindreds with history of severe varicella zoster virus (VZV) infections (PMID: 28783042). One family carried the heterozygous p.Leu11Phe variant; the second carried the p.Arg438Gly variant in POLR3C, together with the variant p.Gln707Arg in POLR3A; and the third carried the p.Arg84Gln variant in POLR3C, together with the variant p.Arg437Gln in POLR3A. [Load More]
[Reviewed by Xiao P. Peng on 2022-07-08]
Associated conditions
Please mind that curation (inclusion of all reported patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of POLR3C
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
201 | ENST00000334163.4 | CCDS72864 | Select | protein_coding | 15 | Yes | 3777 | NM_006468 | |
207 | ENST00000698751.1 | protein_coding | No | NM_001303456 | |||||
212 | ENST00000698756.1 | protein_coding | No | XM_047433903 | |||||
217 | ENST00000698761.1 | protein_coding | No | XM_011509078 | |||||
218 | ENST00000698762.1 | nonsense_mediated_decay | No | XM_047433954 |
Published variants
Found 0 variants
Var.name ⓘ | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that curation (inclusion of all reported gene variants) has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in POLR3C
Please mind that curation (inclusion of all relevant literature) has not started yet. Please contact us if you want to volunteer.
ID | Year | Title | Journal | PMID | Variants |
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