Information on POU2AF1

Basic details

Alt. symbols: OBF1 | BOB1

Approved name: POU class 2 homeobox associating factor 1
Alt. names: POU domain class 2, associating factor 1, POU class 2 associating factor 1

Location: 11q23.1: 111352255 - 111455630 (-)
Gene type: protein_coding, 12 transcripts.

Scores: LoFtool: 0.079600 | pLI: 0.75281787 | LOEUF: 0.568

HGNC: 9211

NCBI: 5450, RefSeq: .0

Ensembl: ENSG00000110777.12

LRG_ | Status: none

OMIM: 601206

Expression | ProteinAtlas

Normal function

BOB1, also known as POU2AF1, is a protein that plays a crucial role in the development and function of B cells. It acts as a co-activator of gene transcription; particularly, it confers octamer-dependent specificity to the transcription factors Oct-1 and Oct-2, and activates and regulates the expression of genes that are key for B cell function, such as those encoding B-cell receptor (BCR) signaling molecules. BOB1 deficiency can alter B-cell differentiation, whereas over-activity of BOB1 can lead to the overproduction of certain proteins, which can contribute to the development of diseases such as lymphoma.

Dysfunction and disease

Complete deficiency of BOB1 has thus far been reported to lead to agammaglobulinemia in one boy (PMID:33571536). Lack of BOB1 in humans can disturb B-cell differentiation and lead to: decreased class-switched memory B cell numbers, relatively increased atypical-memory cells, defective marginal zone–like B-cell formation and abolished plasmablast formation, with overall normal B-cell numbers. Naive B cells may show an abnormal expression pattern of surface receptors and signaling molecules (IgD, IgM, CD79a, CD79b, and Syk). B cells show reduced BAFF-R and CD22 expression and compromised responses to BCR or CD40 stimulation. BOB1 deficiency results in impaired in vivo T-dependent responses, with a lack of germinal centers and a reduction in circulating T-follicular helper (TFH) cells. [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2023-07-11 09:14:26]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AGM14 Agammaglobulinemia 14 ARdict. icon - 1 (1 fams)

Transcripts of POU2AF1

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000393067.8 CCDS31675 Select protein_coding 5 Yes 2875 NM_006235

Published variants

Found 1 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients
T78* EX4 331 c.233del p.Thr78LysfsTer63 frameshift_variant Pathogenic 1

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in POU2AF1

ID Year Title Journal PMID Variants
441 2021 Agammaglobulinemia with normal B-cell numbers in a patient l... JIACI 33571536 1

Phenotypic & functional assays available?

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