Information on PSMG2
Basic details
Alt. symbols: TNFSF5IP1 | HCCA3 | MDS003 | MGC15092 | CLAST3 | HsT1707 | PAC2
Approved name: proteasome assembly chaperone 2
Alt. names: tumor necrosis factor superfamily, member 5-induced protein 1, proteasome (prosome, macropain) assembly chaperone 2 | hepatocellular carcinoma susceptibility protein, CD40 ligand-activated specific transcript 3
Location: 18p11.21: 12658043 - 12728945 (+)
Gene type: protein_coding, 23 transcripts.
Scores: LoFtool: 0.300000 | pLI: 0.00355676 | LOEUF: 1.443
Normal function
Proteasomes are multiprotein complexes with ATP-dependent proteolytic activities essential for intracellular clearance of K48 ubiquitin-tagged peptides and antigen processing to generate class I binding peptides. Proteasome maturation protein (POMP) serves as a chaperone for proteasome assembly and is degraded by the same proteasome upon completion of maturation. Immune cells contain a specialized immunoproteasome (i20S) that selectively incorporates specialized β1i (PSMB9/LMP2), β2i (PSMB10/LMP-10/MECL-1), and β5i (PSMB8/LMP7) catalytic subunits. During an immunological challenge, non-immune cells are stimulated by immune response products (IFN-γ or TNF-α), to upregulate i20S and enhance antigen presentation via class I major histocompatibility complex (MHC-I) molecules, allowing for the generation of an appropriate specific T cell response with subsequent T cell expansion and survival. PSMG2 encodes a chaperone protein that helps promote assembly of the 20S proteasome as part of a heterodimer with PSMG1 (PMID: 30664889). This heterodimer binds to the PSMA5 and PSMA7 proteasome subunits to promote assembly of the proteasome alpha subunits into the heteroheptameric alpha ring and prevent alpha ring dimerization.
Dysfunction and disease
Recently, compound heterozygous PSMG2 mutations were identified in a patient with features of PRAAS and autoimmune hemolytic anemia [OMIM: 619183, PRAAS4] (PMID: 30664889). Autosomal-recessive (AR) biallelic or digenic LOF mutations in constitutive 20S proteasome subunits or immunoproteasome-specific catalytic subunits cause Proteasome-associated autoinflammatory syndromes (PRAAS), characterized by early-onset recurrent fevers, periorbital erythema and swelling, skin lesions (panniculitis with e vidence of neutrophilic dermatosis on biopsy), and lipodystrophy, in addition to intra- and/or extra-cranial calcinosis, myositis, lymphadenopathy, hepatosplenomegaly, progressive joint contractures, metabolic syndrome, recurrent infections and multi-organ failure [OMIM: 256040]. These mutations impair proteasomal assembly, maturation and/or activity, leading to intracellular accumulation of undegraded proteins, ER stress, the unfolded protein response (UPR) and inappropriate type I IFN activation. Patients may be triggered by acute stressors such as cold, physical stress, or infections, leading to a vicious feed-forward cycle of inflammatory chemokine and cytokine production by both hematopoietic and nonhematopoietic cells that may affect any organ. Immunophenotyping may be unremarkable or show overt lymphocyte subset abnormalities and patients can have nonspecifically elevated inflammatory markers, cytopenias, transaminitis, dyslipidemia, hypergammaglobulinemia and variable autoantibody production, along with increased type I IFN production and strong peripheral blood ISGs. JAK inhibitors have been shown to ameliorate disease activity (PMID: 29649002), while HSCT can be curative (PMID: 34416217, 34131834, 33727065). [Load More]
[Reviewed by Xiao P. Peng on 2022-07-09 15:18:18]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of PSMG2
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
204 | ENST00000585331.6 | CCDS67440 | protein_coding | 7 | No | 983 | NM_147163 | ||
201 | ENST00000317615.11 | CCDS11862 | Select | protein_coding | 7 | Yes | 1070 | NM_020232 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
---|
Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in PSMG2
ID | Year | Title | Journal | PMID | Variants |
---|