Information on RELA

Basic details

Alt. symbols: NFKB3 | p65

Approved name: RELA proto-oncogene, NF-kB subunit
Alt. names: nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, v-rel avian reticuloendotheliosis viral oncogene homolog A

Location: 11q13.1: 65653599 - 65663090 (-)
Gene type: protein_coding, 26 transcripts.

Scores: LoFtool: 0.248000 | pLI: 0.99882847 | LOEUF: 0.181

HGNC: 9955

NCBI: 5970, RefSeq: NG_029971.1

Ensembl: ENSG00000173039.20

LRG_ | Status: none

OMIM: 164014

Expression | ProteinAtlas

Normal function

RELA encodes the NF-kB p65 subunit. NF-kB is a homo- or heterodimeric complex composed of p50/p105 (NFKB1) or p52 (NFKB2) bound to either REL, p65 (RELA), or RELB. The most abundant form of NF-kB is p50 complexed with p65. p65 is involved in NF-kB heterodimer formation, nuclear translocation and activation. The NF-kB complex is a pleiotropic transcription factor present in almost all cell types and is the endpoint of a series of signal transduction events that are initiated by a vast array of stimuli related to many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. Different dimer combinations act as transcriptional activators or repressors, respectively. The NF-kB heterodimeric p65-p50 and p65-REL complexes, for instance, function as transcriptional activators.

Dysfunction and disease

Monoallelic RELA pathogenic variants, resulting in haploinsufficiency of the NF-kB subunit RelA (p65), have now been identified in at least 9 patients from 4 kindreds (PMID: 28600438, 26178921, 29305315, 35412596). Acute flares are notable for fevers, leukocytosis, and elevated inflammatory markers, whereas both adaptive and innate immunophenotypic findings may be highly variable and often unremarkable. In keeping with their shared pathophysiology, the clinical spectrum resembles that of HA20/Be hcet’s-like features with IBD and aphthous ulcers and may range from chronic mucocutaneous ulcerations to SLE to autoimmune lymphoproliferative syndrome (ALPS)-like disease. See Clinical info for details. [Load More]

[Reviewed by Xiao P. Peng on 2024-05-12 04:27:43]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AIFBL3 Familial Behcet-like autoinflammatory disease-3 ADdict. icon Haploinsufficiency 618287www icon 0 (0 fams)
RELAIP RELA interferonopathy ADdict. icon Negative Dominance - 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of RELA

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000308639.13 CCDS44651 protein_coding 11 No 2681 NM_001145138
202 ENST00000406246.8 CCDS31609 Select protein_coding 11 Yes 2517 NM_001243984,NM_001404657,NM_001404658,NM_001404659,NM_001404660,NM_001404661,NM_001404662,NM_001404663,NM_021975
226 ENST00000612991.4 CCDS73322 protein_coding 12 No 2266 NM_001243985

Published variants

Found 1 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients
R171S EX6 597 c.513G>T p.Arg171Ser missense_variant Uncertain significance 1

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology - Exon 10 (90-98%)
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in RELA

ID Year Title Journal PMID Variants
118 2021 Establishing the Molecular Diagnoses in a Cohort of 291 Pati... Front. Immunol. 34975878 1

Phenotypic & functional assays available?

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