Information on RIPK1
Alt. symbols: RIP
Approved name: receptor interacting serine/threonine kinase 1
Alt. names: receptor (TNFRSF)-interacting serine-threonine kinase 1 | receptor-interacting protein kinase 1
Location: 6p25.2: 3063824 - 3115187 (+)
Gene type: protein_coding, 19 transcripts.
Scores: LoFtool: 0.387000 | pLI: 0.41817740 | LOEUF: 0.554
Gene Ontology (GO)
- Molecular function: JUN kinase kinase kinase activity [GO:0004706]
- Cell component:
- Biological process:
Normal function
RIPK1 encodes a a serine-threonine kinase that acts as an important regulator of TNF-induced activation of canonical NF-κB signaling and cell death. RIPK1 function is regulated by changes in post-translational modifications, including phosphorylation, ubiquitination and caspase 8-mediated cleavage. It interacts with other cellular RHIM-containing adapters to initiate gene activation and cell death (PMID: 15258597) and forms a necrosis-inducing complex with RIPK3 (PMID: 19524513, 19524512). TNFR1 activation by TNF-alpha family cytokines leads to TRADD and TRAF2 recruitment and Lys-63 ubiquitination by TRAF2 acts as a critical enhancer of communication with downstream MAPK and NF-kappa-B signal transducers, which in turn mediate activation of pro-inflammatory genes (PMID: 11101870, 15258597, 17389591, 19524512, 119524513). Disrupted TNF-mediated RIPK1 ubiquitination induces activation of cell death via apoptosis or necroptosis.
Dysfunction and disease
Both mono- and bi-allelic variants in RIPK1 are associated with inborn errors of immunity (IEIs). Dominant pathogenic variants that block Caspase-8-mediated RIPK1 cleavage lead to its over-activation, and the promotion of RDA and necroptosis, associated with CRIA, a predominantly autoinflammatory disease featuring recurrent fevers and intermittent lymphadenopathy (PMID: 31827281, 31827280). Recessive RIPK1 deficiency due to pathogenic LOF variants leads to reduced NF-kB activation and dysregulat ed cell death under specific stimulatory conditions. These patients present with variable immunodeficiency, gastrointestinal (GI) issues, and arthritis (PMID: 30026316, 30591564, 31213653). Rarely, neurodevelopmental issues have been reported in addition to the features described above (PMID: 31213653). Most recently, compound heterozygous missense variants leading to an autosomal recessive gain-of-function mechanism were reported in patients with autoinflammatory features (recurrent fevers, lymphadenopathy and skin rash) driven by RIPK1 activation-induced T cell death (https://doi.org/10.1101/2024.03.28.24304774). [Load More]
[Reviewed by Xiao P. Peng on 2024-07-24]
Associated conditions
Please mind that curation (inclusion of all reported patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of RIPK1
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
202 | ENST00000380409.3 | protein_coding | 10 | No | 3947 | NM_001317061,NM_001354931,NM_001354932,NM_001354933,NM_001354934 | |||
205 | ENST00000676618.1 | nonsense_mediated_decay | No | 1442 | XM_006715237 | ||||
208 | ENST00000676995.1 | processed_transcript | No | XM_017011405 | |||||
201 | ENST00000259808.9 | CCDS4482 | Select | protein_coding | 11 | Yes | 4092 | NM_001354930,NM_003804 |
Published variants
Found 0 variants
Var.name ⓘ | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that curation (inclusion of all reported gene variants) has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in RIPK1
Please mind that curation (inclusion of all relevant literature) has not started yet. Please contact us if you want to volunteer.
ID | Year | Title | Journal | PMID | Variants |
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