Information on RIPK1

Basic details

Alt. symbols: RIP

Approved name: receptor interacting serine/threonine kinase 1
Alt. names: receptor (TNFRSF)-interacting serine-threonine kinase 1 | receptor-interacting protein kinase 1

Location: 6p25.2: 3063824 - 3115187 (+)
Gene type: protein_coding, 19 transcripts.

Scores: LoFtool: 0.387000 | pLI: 0.41817740 | LOEUF: 0.554

HGNC: 10019

NCBI: 8737, RefSeq: NG_063914.1

Ensembl: ENSG00000137275.16

LRG_ | Status: none

OMIM: 603453

Expression | ProteinAtlas

Normal function

RIPK1 encodes a a serine-threonine kinase that acts as an important regulator of TNF-induced activation of canonical NF-κB signaling and cell death. RIPK1 function is regulated by changes in post-translational modifications, including phosphorylation, ubiquitination and caspase 8-mediated cleavage. It interacts with other cellular RHIM-containing adapters to initiate gene activation and cell death (PMID: 15258597) and forms a necrosis-inducing complex with RIPK3 (PMID: 19524513, 19524512). TNFR1 activation by TNF-alpha family cytokines leads to TRADD and TRAF2 recruitment and Lys-63 ubiquitination by TRAF2 acts as a critical enhancer of communication with downstream MAPK and NF-kappa-B signal transducers, which in turn mediate activation of pro-inflammatory genes (PMID: 11101870, 15258597, 17389591, 19524512, 119524513). Disrupted TNF-mediated RIPK1 ubiquitination induces activation of cell death via apoptosis or necroptosis.

Dysfunction and disease

Both mono- and bi-allelic variants in RIPK1 are associated with inborn errors of immunity (IEIs). Dominant pathogenic variants that block Caspase-8-mediated RIPK1 cleavage lead to its over-activation, and the promotion of RDA and necroptosis, associated with CRIA, a predominantly autoinflammatory disease featuring recurrent fevers and intermittent lymphadenopathy (PMID: 31827281, 31827280). Recessive RIPK1 deficiency due to pathogenic LOF variants leads to reduced NF-kB activation and dysregulat ed cell death under specific stimulatory conditions. These patients present with variable immunodeficiency, gastrointestinal (GI) issues, and arthritis (PMID: 30026316, 30591564, 31213653). Rarely, neurodevelopmental issues have been reported in addition to the features described above (PMID: 31213653). Most recently, compound heterozygous missense variants leading to an autosomal recessive gain-of-function mechanism were reported in patients with autoinflammatory features (recurrent fevers, lymphadenopathy and skin rash) driven by RIPK1 activation-induced T cell death (https://doi.org/10.1101/2024.03.28.24304774). [Load More]

[Reviewed by Xiao P. Peng on 2024-07-24 20:00:35]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AIEFL Autoinflammation with episodic fever and lymphadenopathy ADdict. icon Gain of Function 618852www icon 0 (0 fams)
IMD57 Immunodeficiency 57 with autoinflammation ARdict. icon Loss of Function 618108www icon 2 (2 fams)
AIEFL2 Autoinflammation with episodic fever and lymphadenopathy 2 ARdict. icon Gain of Function - 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of RIPK1

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
202 ENST00000380409.3 protein_coding 10 No 3947 NM_001317061,NM_001354931,NM_001354932,NM_001354933,NM_001354934
205 ENST00000676618.1 nonsense_mediated_decay No 1442 XM_006715237
208 ENST00000676995.1 processed_transcript No XM_017011405
201 ENST00000259808.9 CCDS4482 Select protein_coding 11 Yes 4092 NM_001354930,NM_003804

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in RIPK1

ID Year Title Journal PMID Variants

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