Information on C6
Basic details
Alt. symbols:
Approved name: complement C6
Alt. names: complement component 6
Location: 5p13.1: 41142116 - 41261438 (-)
Gene type: protein_coding, 11 transcripts.
Scores: LoFtool: 0.273000 | pLI: 0.00000000 | LOEUF: 0.993
Normal function
The C6 gene encodes a serum glycoprotein (C6) that forms a membrane attack complex (MAC) together with complement components C5b, C7, C8, and C9 as part of the terminal complement pathway of the innate immune system. The MAC perforates cell membranes, forming transmembrane channels in order to facilitate cell lysis.
Dysfunction and disease
Biallelic mutations in C6 may cause complement C6 deficiency (C6D) [MIM:612446] or combined C6/C7 deficiency, a rare disease associated with susceptibility to severe recurrent infections, predominantly by Neisseria species. Of note, homozygous C6D has been rarely observed in Caucasians but has been reported at higher prevalence among African-Americans living in the Southeastern United States (PMID: 10632667). There have been at least 3 reports of patients with C6D presenting with SLE-like phenot ypes. Though there has been a long-standing link between monogenic lupus and early classical complement components, this has been reported since the 1980s for terminal complement components as well. Zeitz et al. (1981) noted systemic lupus erythematosus (SLE) or an SLE-like syndrome in 7% of individuals with hereditary C5, C7, C8, or C9 deficiency (PMID: 7470173). Tedesco et al. (1981) reported complete C6D in association with an SLE-like illness (PMID: 7317125) and Trapp et al. (1987) described discoid lupus, Sjogren’s and hyperthyroidism in another complete C6D patient (PMID: 3430506). Wisniewski et al. (1985) reported a third complete C6D patient presenting with a systemic rheumatic illness characterized by fever, anemia, lymphadenopathy, hepatosplenomegaly, episcleritis, and asymmetric arthritis who was found to have developed anti-C6 antibodies (PMID: 3931570). Dragon-Durey et al. (2003) identified complete C6D in 7 unrelated individuals of North or Central Africa descent living in France, of whom 4 presented with Neisseria meningitidis infections, 1 with focal and segmental glomerulosclerosis with hyalinosis, 1 with SLE and 1 with Still's disease (PMID: 12653841). Kallel-Sellami et al. (2007) reported combined homozygous C2 and C6 deficiency in a discoid lupus patient (PMID: 17893986). Most recently, in their large cohort of patients with various complement deficiencies, El-Sissy et al. (2019) found that 10 of 50 patients with C6D had some form of autoimmune disease (PMID: 31440263). [Load More]
[Reviewed by Andrés Caballero-Oteyza on 2022-05-11 08:17:26]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of C6
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
201 | ENST00000263413.7 | CCDS3936 | protein_coding | 18 | No | 3661 | NM_001115131 | ||
202 | ENST00000337836.10 | 1 | CCDS3936 | Select | protein_coding | 18 | Yes | 3691 | NM_000065 |
Published variants
Found 1 variants
Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |