Information on TICAM1

Basic details

Alt. symbols: TRIF | TICAM-1 | MGC35334 | PRVTIRB

Approved name: TIR domain containing adaptor molecule 1
Alt. names: toll-like receptor adaptor molecule 1 | TIR domain-containing adapter molecule 1, TIR domain-containing adaptor-inducing interferon-?

Location: 19p13.3: 4815932 - 4831712 (-)
Gene type: protein_coding, 1 transcripts.

Scores: LoFtool: 0.350000 | pLI: 0.85247731 | LOEUF: 0.000

HGNC: 18348

NCBI: 148022, RefSeq: NG_031998.1

Ensembl: ENSG00000127666.11

LRG_358 | Status: public

OMIM: 607601

Expression | ProteinAtlas

Normal function

This gene encodes TRIF an adaptor protein containing a Toll/interleukin-1 receptor (TIR) homology domain, which mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TRIF is involved in native immunity against invading pathogens because it interacts directly with toll-like receptor 3 (TLR3) and TLR5, and indirectly (through TRAM) with TLR4. TRIF then transmits the signalling cascade to TRAF molecules (TRAF3, TRAF6) which mediate the induction of type-1-interferon and the production of inflammatory cytokines through NFkB activation, during an antiviral immune response.

Dysfunction and disease

Both monoallelic and biallelic mutations in TICAM1 have been associated with herpes simplex encephalitis (HSE) type 6 [MIM:614850]. In 2011, Sancho-Shimizu and colleagues reported 2 unrelated HSE cases (with no other infections) due to TRIF deficiency. The first case was a boy born to a consanguineous family, who carried a homozygous nonsense mutation (p.R141X) that resulted in a complete absence of the TRIF protein. The authors showed that both the TLR3- and the (TRIF-dependent) TLR4 signalling pathways were abolished. The second case was a girl who carried an heterozygous missense mutation (p.S186L) which had been transmitted in the family in an autosomal dominant manner. This mutation led to an impaired TLR3 signalling but did not alter the TLR4 pathway. However, both patients displayed reduced capacity to respond to stimulation of the DExD/H-box helicases pathway. In the second family, the mutation showed incomplete penetrance. In 2015, Mork et al. reported 2 individuals with adult-onset HSE who respectively carried the p.A568T and the p.S160F missense mutations; thus suggesting that TICAM1 mutation may also confer susceptibility to HSE in adulthood. [Load More]

[Reviewed by Hanna Haberstroh on 2020-07-22 12:49:49]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
IIAE6 Susceptibility to acute infection-induced encephalopathy type 6 AD/ARdict. icon 614850www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of TICAM1

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000248244.6 1 CCDS12136 Select protein_coding 2 Yes 2684 NM_001385678,NM_001385679,NM_001385680,NM_182919

Published variants

Found 2 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients
A568T EX2 1940 c.1702G>A p.Ala568Thr missense_variant Uncertain significance 0
S160F EX2 717 c.479C>T p.Ser160Phe missense_variant Risk allele 0

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in TICAM1

ID Year Title Journal PMID Variants
89 2015 Mutations in the TLR3 signaling pathway and beyond in adult ... Genes & Immun. 26513235 2

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