Information on CD70
Basic details
Alt. symbols: CD27LG | TNFSF7 | CD27L
Approved name: CD70 molecule
Alt. names: tumor necrosis factor (ligand) superfamily, member 7
Location: 19p13.3: 6583183 - 6604103 (-)
Gene type: protein_coding, 3 transcripts.
Scores: LoFtool: 0.259000 | pLI: 0.04575221 | LOEUF: 1.746
Normal function
CD70 encodes a TNFSF ligand for the CD27 receptor, transducing signals that lead to the downstream activation of NF-kB and MAPK8/JNK. Signaling through CD27/CD70 is required for the generation and long-term maintenance of T cell immunity, including survival of activated T cells, and plays a key role in regulating B-cell activation and Ig synthesis by T cells. CD70 is expressed on activated T and B cells, while CD27 is expressed on resting T and B cells (PMID: 7479974).
Dysfunction and disease
Mutations in both CD27 and CD70 have been reported to be associated with CVID in both single case reports and WES cohorts (PMID: 31942606). However, significantly fewer examples of CD70 deficiency, associated with autosomal recessive LPFS3 [MIM:618261], are known relative to CD27 deficiency. Like the latter, these patients show hypogammaglobulinemia (for which at least 1 was given a CVID diagnosis) and increased susceptibility to EBV infection, resulting in abnormal B-cell proliferation and inc reased B-cell malignancy risk. Albohassani et al. (2017) noted that, despite overall normal levels of lymphocytes and T-cell proliferative responses, memory B cells and EBV-specific effector memory CD8+ T cell levels and activity were reduced, reflecting impaired activation (PMID: 28011864). [Load More]
[Reviewed by Xiao P. Peng on 2022-07-09 10:45:19]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of CD70
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
202 | ENST00000423145.7 | CCDS82283 | protein_coding | 4 | No | 881 | NM_001330332 | ||
201 | ENST00000245903.4 | CCDS12170 | Select | protein_coding | 3 | Yes | 911 | NM_001252 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in CD70
ID | Year | Title | Journal | PMID | Variants |
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