Information on UNC13D
Basic details
Alt. symbols: Munc13-4
Approved name: unc-13 homolog D
Alt. names: unc-13 homolog D (C. elegans)
Location: 17q25.1: 75827225 - 75844785 (-)
Gene type: protein_coding, 21 transcripts.
Scores: LoFtool: 0.763000 | pLI: 0.00000000 | LOEUF: 0.773
Normal function
Munc13-4 is a member of the Munc13-like family of proteins. It is highly expressed in CTL, NK cells, and mast cells and it is involved in granule exocytosis. Once granules are tethered to the plasma membrane, a priming step is required to enable fusion of the granule membrane with the plasma membrane. In this priming step, granules interact with a docking complex composed of Munc18-2 and Syntaxin-11. Thus, Munc13-4 triggers the switch of syntaxin-11 from a closed to an open conformation enabling fusion.
Dysfunction and disease
Biallelic missense, nonsense, frameshift and deep intronic UNC13D mutations are associated with autosomal recessive familial Hemophagocytic lymphohistiocytosis (fHLH) type 3 [MIM:608898] (PMID: 32076423), though immune dysregulation may present in other ways prior to the onset of frank HLH/macrophage activation syndrome (MAS) (PMID: 32222431, 28848550). In terms of monoallelic phenotypes, emerging evidence suggests that heterozygous loss-of-function may predispose to either malignant or non-mali gnant lymphoproliferation. One study reported missense variants C112S, V781I, I848L and A995P associated with autoimmune lymphoproliferative syndrome (ALPS) susceptibility and reduced granule exocytosis on in vitro assay (PMID: 23840885), while another reported an association between UNC13D haploinsufficiency and increased risk for lymphoma (PMID: 30758854). Additionally, heterozygous missense variants in UNC13D (R156W and R587C) were associated with decreased platelet degranulation, increased bleeding tendencies and/or thrombocytopenia in one study (PMID: 28399723). [Load More]
[Reviewed by Andrés Caballero-Oteyza on 2020-12-01 15:35:03]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not been completed yet. It is currently ongoing.
Transcripts of UNC13D
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
201 | ENST00000207549.9 | 1 | CCDS11730 | Select | protein_coding | 32 | Yes | 4080 | NM_199242 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not been completed yet. It is currently ongoing.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in UNC13D
ID | Year | Title | Journal | PMID | Variants |
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