Information on UNC13D

Basic details

Alt. symbols: Munc13-4

Approved name: unc-13 homolog D
Alt. names: unc-13 homolog D (C. elegans)

Location: 17q25.1: 75827225 - 75844785 (-)
Gene type: protein_coding, 21 transcripts.

Scores: LoFtool: 0.763000 | pLI: 0.00000000 | LOEUF: 0.773

HGNC: 23147

NCBI: 201294, RefSeq: NG_007266.1

Ensembl: ENSG00000092929.13

LRG_122 | Status: public

OMIM: 608897

Expression | ProteinAtlas

Normal function

Munc13-4 is a member of the Munc13-like family of proteins. It is highly expressed in CTL, NK cells, and mast cells and it is involved in granule exocytosis. Once granules are tethered to the plasma membrane, a priming step is required to enable fusion of the granule membrane with the plasma membrane. In this priming step, granules interact with a docking complex composed of Munc18-2 and Syntaxin-11. Thus, Munc13-4 triggers the switch of syntaxin-11 from a closed to an open conformation enabling fusion.

Dysfunction and disease

Biallelic missense, nonsense, frameshift and deep intronic UNC13D mutations are associated with autosomal recessive familial Hemophagocytic lymphohistiocytosis (fHLH) type 3 [MIM:608898] (PMID: 32076423), though immune dysregulation may present in other ways prior to the onset of frank HLH/macrophage activation syndrome (MAS) (PMID: 32222431, 28848550). In terms of monoallelic phenotypes, emerging evidence suggests that heterozygous loss-of-function may predispose to either malignant or non-mali gnant lymphoproliferation. One study reported missense variants C112S, V781I, I848L and A995P associated with autoimmune lymphoproliferative syndrome (ALPS) susceptibility and reduced granule exocytosis on in vitro assay (PMID: 23840885), while another reported an association between UNC13D haploinsufficiency and increased risk for lymphoma (PMID: 30758854). Additionally, heterozygous missense variants in UNC13D (R156W and R587C) were associated with decreased platelet degranulation, increased bleeding tendencies and/or thrombocytopenia in one study (PMID: 28399723). [Load More]

[Reviewed by Andrés Caballero-Oteyza on 2020-12-01 15:35:03]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
FHL3 Hemophagocytic Lymphohistiocytosis, familial, 3 ARdict. icon 608898www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not been completed yet. It is currently ongoing.

Transcripts of UNC13D

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
201 ENST00000207549.9 1 CCDS11730 Select protein_coding 32 Yes 4080 NM_199242

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not been completed yet. It is currently ongoing.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in UNC13D

ID Year Title Journal PMID Variants

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