Information on ZAP70

Basic details

Alt. symbols: SRK | ZAP-70 | STD

Approved name: zeta chain of T cell receptor associated protein kinase 70
Alt. names: SRK | tyrosine-protein kinase ZAP-70

Location: 2q11.2: 97713576 - 97744327 (+)
Gene type: protein_coding, 11 transcripts.

Scores: LoFtool: 0.053300 | pLI: 0.27266725 | LOEUF: 0.364

HGNC: 12858

NCBI: 7535, RefSeq: NG_007727.1

Ensembl: ENSG00000115085.16

LRG_126 | Status: public

OMIM: 176947

Expression | ProteinAtlas

Normal function

The ZAP70 gene encodes the called zeta-chain-associated protein kinase. This protein interacts with the zeta-chain of the T-cell receptor (TCR), and it is predominantly expressed in T and NK cells. ZAP70 is part of the signalling pathway that activates T cells and directs their development. Thus, ZAP70 is important for the development and function of several T cells subtypes. These include cytotoxic (CD8+) T cells, and helper (CD4+) T cells.

Dysfunction and disease

Biallelic mutations in ZAP70 cause an autosomal recessive form of severe combined immunodeficiency (SCID) that is also known as Immunodeficiency 48 (IMD48) [MIM:269840]. Most individuals with ZAP70-related SCID are diagnosed in the first 6 months of life. At least one individual first showed signs of the condition later in childhood and had less severe symptoms, primarily recurrent respiratory and skin infections. Patients usually present pneumonias, hepatomegaly and or splenomegaly, Candidiasis and eczematous rashes, reduced number of CD8 T cells and abundant number of CD4 T cells, and number number of B cells but with reduced function. Mutations in ZAP70 have also been associated with autoimmune disease, multisystem, infantile-onset, 2 [MIM:617006]. [Load More]

[Reviewed by Andrés Caballero-Oteyza on ]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
ADMIO2 Autoimmune disease, multisystem, infantile-onset 2 ARdict. icon 617006www icon 0 (0 fams)
IMD48 Immunodeficiency 48 ARdict. icon 269840www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of ZAP70

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
202 ENST00000451498.2 CCDS33255 protein_coding 6 No 1085 NM_207519
201 ENST00000264972.10 1 CCDS33254 Select protein_coding 14 Yes 2421 NM_001079
209 ENST00000698508.2 protein_coding No NM_001378594

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in ZAP70

ID Year Title Journal PMID Variants

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