Information on ZAP70
Basic details
Alt. symbols: SRK | ZAP-70 | STD
Approved name: zeta chain of T cell receptor associated protein kinase 70
Alt. names: SRK | tyrosine-protein kinase ZAP-70
Location: 2q11.2: 97713576 - 97744327 (+)
Gene type: protein_coding, 11 transcripts.
Scores: LoFtool: 0.053300 | pLI: 0.27266725 | LOEUF: 0.364
Normal function
The ZAP70 gene encodes the called zeta-chain-associated protein kinase. This protein interacts with the zeta-chain of the T-cell receptor (TCR), and it is predominantly expressed in T and NK cells. ZAP70 is part of the signalling pathway that activates T cells and directs their development. Thus, ZAP70 is important for the development and function of several T cells subtypes. These include cytotoxic (CD8+) T cells, and helper (CD4+) T cells.
Dysfunction and disease
Biallelic mutations in ZAP70 cause an autosomal recessive form of severe combined immunodeficiency (SCID) that is also known as Immunodeficiency 48 (IMD48) [MIM:269840]. Most individuals with ZAP70-related SCID are diagnosed in the first 6 months of life. At least one individual first showed signs of the condition later in childhood and had less severe symptoms, primarily recurrent respiratory and skin infections. Patients usually present pneumonias, hepatomegaly and or splenomegaly, Candidiasis and eczematous rashes, reduced number of CD8 T cells and abundant number of CD4 T cells, and number number of B cells but with reduced function. Mutations in ZAP70 have also been associated with autoimmune disease, multisystem, infantile-onset, 2 [MIM:617006]. [Load More]
[Reviewed by Andrés Caballero-Oteyza on ]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of ZAP70
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
202 | ENST00000451498.2 | CCDS33255 | protein_coding | 6 | No | 1085 | NM_207519 | ||
201 | ENST00000264972.10 | 1 | CCDS33254 | Select | protein_coding | 14 | Yes | 2421 | NM_001079 |
209 | ENST00000698508.2 | protein_coding | No | NM_001378594 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in ZAP70
ID | Year | Title | Journal | PMID | Variants |
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