Information on ADGRE2
Basic details
Alt. symbols: EMR2 | CD312
Approved name: adhesion G protein-coupled receptor E2
Alt. names: egf-like module containing, mucin-like, hormone receptor-like sequence 2, egf-like module containing, mucin-like, hormone receptor-like 2
Location: 19p13.12: 14732392 - 14778560 (-)
Gene type: protein_coding, 13 transcripts.
Scores: LoFtool: 0.011000 | pLI: 0.00000000 | LOEUF: 1.253
Normal function
ADGRE2 encodes the adhesion G protein-coupled receptor E2, also known as EMR2, which is a cell surface receptor expressed by monocytes/macrophages, dendritic cells and granulocytes. ADGRE2 promotes cell-cell adhesion through interaction with its ligand chondroitin sulfate B. Additionally, ADGRE2 has a role in potentiating inflammatory responses by promoting the release of inflammatory cytokines through macrophages, including IL8 and TNF.
Dysfunction and disease
ADGRE2 is associated with autosomal dominant vibratory urticaria [MIM:125630], a condition characterized with local hives (urticaria), swelling, redness and itching of the skin, if exposed to vibration, repetitive stretching or friction. The phenotype is described as an exaggeration of a normal cellular response to dermal vibration. Up to date, one gain of function mutation in ADGRE2, p.Cys492Tyr, is known to cause the disease and functional assessment of this variant has shown that it leads to hypersensitized mast cells resulting in vibration-induced excessive degranulation of the cells. Another potential connection of ADGRE2 to disease was brought by a study of Aust et al. in 2003, in which different ADGRE2 splice variants were detected in colorectal carcinoma cell lines and adenocarcinomas at the mRNA level. However, the protein was only rarely expressed in those cells and expression did not correlate with in vitro migration or invasion capacity of the cells, questioning ADGRE2’s clinical significance in those tumors. [Load More]
[Reviewed by Andrés Caballero-Oteyza on ]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of ADGRE2
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
203 | ENST00000392962.3 | nonsense_mediated_decay | No | 1497 | XM_047438734 | ||||
212 | ENST00000601345.5 | protein_coding | 20 | No | 3128 | XM_011527949 | |||
209 | ENST00000596991.6 | protein_coding | 20 | No | 2596 | XM_047438721 | |||
206 | ENST00000594294.5 | protein_coding | 19 | No | 2325 | NM_152916 | |||
201 | ENST00000315576.8 | CCDS32935 | Select | protein_coding | 21 | Yes | 6791 | NM_013447 | |
205 | ENST00000594076.5 | protein_coding | 18 | No | 2193 | NM_152917 | |||
204 | ENST00000392965.7 | CCDS59361 | protein_coding | 19 | No | 2513 | NM_001271052 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in ADGRE2
ID | Year | Title | Journal | PMID | Variants |
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