Information on DNAJC21

Basic details

Alt. symbols: GS3 | DNAJA5 | JJJ1

Approved name: DnaJ heat shock protein family (Hsp40) member C21
Alt. names: DnaJ (Hsp40) homolog, subfamily C, member 21 | JJJ1 DnaJ domain protein homolog (S. cerevisiae)

Location: 5p13.2: 34929559 - 34958964 (+)
Gene type: protein_coding, 15 transcripts.

Scores: LoFtool: 0.958000 | pLI: 0.00001451 | LOEUF: 0.720

HGNC: 27030

NCBI: 134218, RefSeq: NG_052822.1

Ensembl: ENSG00000168724.18

LRG_1214 | Status: public

OMIM: 617048

Expression | ProteinAtlas

Normal function

DNAJC21 encodes a member of a highly conserved protein family involved in translation, protein folding and unfolding, translocation, and degradation, primarily by stimulating the ATPase activity of HSP70 chaperone proteins. As such, it is thought to act as a co-chaperone for HSP70 family members and play a role in ribosomal RNA (rRNA) biogenesis, possibly in 60S subunit maturation.

Dysfunction and disease

Biallelic nonsense, missense, frameshift and deletion mutations in DNAJC21 are associated with bone marrow failure syndrome-3 [OMIM:617052], an autosomal recessive disorder with features overlapping both Shwachman-Diamond syndromes (SDS) and dyskeratosis congenita/short telomere syndromes. These include early onset pancytopenia and/or aplastic anemia; short stature, poor growth and otherwise impaired development; microcephaly; and dental, skin and hair abnormalities. In addition, some patients m ay have recurrent infections; pancreatic insufficiency and liver disease; joint and skeletal abnormalities; retinal dysplasia and other ophthalmologic findings; genito-urinary anomalies; and shortened telomeres. Of note, IBD has been associated with multiple short telomere disorders, including patients with RTEL1 and DKC1 mutations (PMID: 28930861, 32710398), while altered telomere binding protein expression has been found in IBD patients (PMID: 20061197). Moreover, an IBD-like presentation has been reported for patients with SDS-associated mutations in SBDS (PMID: 31196706) or SRP54 (PMID: 32633164). Indeed, unspecified immune defects, enteropathy, inflammatory polyps, and history of colectomy have been described for patients with DNAJC21 mutations (PMID: 27346687). [Load More]

[Reviewed by Xiao P. Peng on 2022-07-08 04:53:39]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
BMFS3b Bone marrow failure syndrome 3b ARdict. icon 617052www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of DNAJC21

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
211 ENST00000648817.1 1 CCDS34144 Select protein_coding 12 Yes 6107 NM_001012339
201 ENST00000382021.2 CCDS3907 protein_coding 13 No 6208 NM_194283
208 ENST00000642851.1 CCDS87294 protein_coding 12 No 2788 NM_001348420
206 ENST00000642285.1 protein_coding 13 No 2276 XM_047416722

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in DNAJC21

ID Year Title Journal PMID Variants

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