Information on DNAJC21
Basic details
Alt. symbols: GS3 | DNAJA5 | JJJ1
Approved name: DnaJ heat shock protein family (Hsp40) member C21
Alt. names: DnaJ (Hsp40) homolog, subfamily C, member 21 | JJJ1 DnaJ domain protein homolog (S. cerevisiae)
Location: 5p13.2: 34929559 - 34958964 (+)
Gene type: protein_coding, 15 transcripts.
Scores: LoFtool: 0.958000 | pLI: 0.00001451 | LOEUF: 0.720
Normal function
DNAJC21 encodes a member of a highly conserved protein family involved in translation, protein folding and unfolding, translocation, and degradation, primarily by stimulating the ATPase activity of HSP70 chaperone proteins. As such, it is thought to act as a co-chaperone for HSP70 family members and play a role in ribosomal RNA (rRNA) biogenesis, possibly in 60S subunit maturation.
Dysfunction and disease
Biallelic nonsense, missense, frameshift and deletion mutations in DNAJC21 are associated with bone marrow failure syndrome-3 [OMIM:617052], an autosomal recessive disorder with features overlapping both Shwachman-Diamond syndromes (SDS) and dyskeratosis congenita/short telomere syndromes. These include early onset pancytopenia and/or aplastic anemia; short stature, poor growth and otherwise impaired development; microcephaly; and dental, skin and hair abnormalities. In addition, some patients m ay have recurrent infections; pancreatic insufficiency and liver disease; joint and skeletal abnormalities; retinal dysplasia and other ophthalmologic findings; genito-urinary anomalies; and shortened telomeres. Of note, IBD has been associated with multiple short telomere disorders, including patients with RTEL1 and DKC1 mutations (PMID: 28930861, 32710398), while altered telomere binding protein expression has been found in IBD patients (PMID: 20061197). Moreover, an IBD-like presentation has been reported for patients with SDS-associated mutations in SBDS (PMID: 31196706) or SRP54 (PMID: 32633164). Indeed, unspecified immune defects, enteropathy, inflammatory polyps, and history of colectomy have been described for patients with DNAJC21 mutations (PMID: 27346687). [Load More]
[Reviewed by Xiao P. Peng on 2022-07-08 04:53:39]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of DNAJC21
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
211 | ENST00000648817.1 | 1 | CCDS34144 | Select | protein_coding | 12 | Yes | 6107 | NM_001012339 |
201 | ENST00000382021.2 | CCDS3907 | protein_coding | 13 | No | 6208 | NM_194283 | ||
208 | ENST00000642851.1 | CCDS87294 | protein_coding | 12 | No | 2788 | NM_001348420 | ||
206 | ENST00000642285.1 | protein_coding | 13 | No | 2276 | XM_047416722 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
---|
Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in DNAJC21
ID | Year | Title | Journal | PMID | Variants |
---|