Information on ELF4
Basic details
Alt. symbols: MEF | ELFR
Approved name: E74 like ETS transcription factor 4
Alt. names: E74-like factor 4 (ets domain transcription factor)
Location: Xq26.1: 130063955 - 130110716 (-)
Gene type: protein_coding, 3 transcripts.
Scores: LoFtool: 0.359000 | pLI: 0.61146408 | LOEUF: 0.644
Normal function
ELF4 encodes a transcriptional activator that binds promoters of many hematopoietic target genes including growth factors such as CSF2, IL3, and IL8, as well as PRF1 in natural killer (NK) cells (PMID: 27932483). As such, it plays a role in the development and function of NK and NK T-cells and in innate immunity, but also controls the proliferation and homing of CD8+ T-cells via KLF4 and KLF2 (PMID: 19412182). ELF4 has also been implicated in control of cellular senescence in a p53-dependent manner and may promote transformation through inhibition of the p16 pathway (PMID: 27932483).
Dysfunction and disease
X-linked LOF variants in the ETS transcription factor gene ELF4 were identified in multiple unrelated male patients with early-onset fevers, mucosal autoinflammation and IBD that responded to IL-1, TNF or IL-12p40 blockade (PMID: 34326534). Two of three patients had suboptimal vaccine responses or significantly elevated serum CXCL1 levels. Labs from 1 patient showed low NK cells and low CD27+ memory B cells, increased numbers of naïve CD4+ and CD8+ T cells compared to healthy controls, and eleva ted calprotectin. Another showed lymphocytosis, thrombocytosis and elevated ESR with normal IgG and IgE, normal T cells and slightly elevated B cells. Like the mouse models, patient cells showed impaired ELF4-mediated suppression of inflammatory TH17 cell responses and increased production of pro-inflammatory cytokines such as IL-1β and IL-6, as well as intracellular IL-12p40 from patient monocytes. [Load More]
[Reviewed by Xiao P. Peng on 2022-06-22 07:22:25]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of ELF4
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
202 | ENST00000335997.11 | CCDS14617 | protein_coding | 9 | No | 4145 | NM_001127197 | ||
201 | ENST00000308167.10 | 1 | CCDS14617 | Select | protein_coding | 9 | Yes | 5140 | NM_001421 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Skewed X-linked inactivation | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in ELF4
ID | Year | Title | Journal | PMID | Variants |
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