Information on ELF4

Basic details

Alt. symbols: MEF | ELFR

Approved name: E74 like ETS transcription factor 4
Alt. names: E74-like factor 4 (ets domain transcription factor)

Location: Xq26.1: 130063955 - 130110716 (-)
Gene type: protein_coding, 3 transcripts.

Scores: LoFtool: 0.359000 | pLI: 0.61146408 | LOEUF: 0.644

HGNC: 3319

NCBI: 2000, RefSeq: NG_016388.1

Ensembl: ENSG00000102034.18

LRG_335 | Status: public

OMIM: 300775

Expression | ProteinAtlas

Normal function

ELF4 encodes a transcriptional activator that binds promoters of many hematopoietic target genes including growth factors such as CSF2, IL3, and IL8, as well as PRF1 in natural killer (NK) cells (PMID: 27932483). As such, it plays a role in the development and function of NK and NK T-cells and in innate immunity, but also controls the proliferation and homing of CD8+ T-cells via KLF4 and KLF2 (PMID: 19412182). ELF4 has also been implicated in control of cellular senescence in a p53-dependent manner and may promote transformation through inhibition of the p16 pathway (PMID: 27932483).

Dysfunction and disease

X-linked LOF variants in the ETS transcription factor gene ELF4 were identified in multiple unrelated male patients with early-onset fevers, mucosal autoinflammation and IBD that responded to IL-1, TNF or IL-12p40 blockade (PMID: 34326534). Two of three patients had suboptimal vaccine responses or significantly elevated serum CXCL1 levels. Labs from 1 patient showed low NK cells and low CD27+ memory B cells, increased numbers of naïve CD4+ and CD8+ T cells compared to healthy controls, and eleva ted calprotectin. Another showed lymphocytosis, thrombocytosis and elevated ESR with normal IgG and IgE, normal T cells and slightly elevated B cells. Like the mouse models, patient cells showed impaired ELF4-mediated suppression of inflammatory TH17 cell responses and increased production of pro-inflammatory cytokines such as IL-1β and IL-6, as well as intracellular IL-12p40 from patient monocytes. [Load More]

[Reviewed by Xiao P. Peng on 2022-06-22 07:22:25]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AIFBL2 Autoinflammatory syndrome, familial, X-linked, Behcet-like 2 XLRdict. icon 301074www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of ELF4

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
202 ENST00000335997.11 CCDS14617 protein_coding 9 No 4145 NM_001127197
201 ENST00000308167.10 1 CCDS14617 Select protein_coding 9 Yes 5140 NM_001421

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
-Cryptic splicing-Unreported or not recorded in our DB.
-Uniparental disomy-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Skewed X-linked inactivation-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in ELF4

ID Year Title Journal PMID Variants

Phenotypic & functional assays available?

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