Information on FANCE
Alt. symbols: FACE | FAE
Approved name: FA complementation group E
Alt. names: Fanconi anemia complementation group E
Location: 6p21.31: 35452338 - 35467104 (+)
Gene type: protein_coding, 8 transcripts.
Scores: LoFtool: 0.818000 | pLI: 0.00313890 | LOEUF: 0.892
Gene Ontology (GO)
- Molecular function:
- Cell component: Fanconi anaemia nuclear complex [GO:0043240]
- Biological process:
Normal function
This gene encodes the FANCE protein, which is one of the 8 proteins that form the Fanconi anemia (FA) core complex. The FA core complex, together with two additional proteins called Fanconi anemia-associated proteins (FAAPs), activates two proteins, called FANCD2 and FANCI, by a monoubiquitination process. The FA complex functions in DNA cross-links repair. FANCE is required for the nuclear accumulation of FANCC and provides a critical bridge between the FA complex and FANCD2. A nuclear complex containing FANCE protein (as well as FANCC, FANCF and FANCG) is essential for the activation of the FANCD2 protein to the mono-ubiquitinated isoform. All members of the Fanconi anemia complementation group do not share sequence similarity; they are related because they assemble together into the FA protein complex.
Dysfunction and disease
Biallelic loss-of-function mutations in this gene cause Fanconi anemia complementation group E (FANCE) [MIM:600901]: An inherited recessive disorder affecting the bone marrow that results in anemia, leukopenia and thrombopenia. It is associated with cardiac, renal and limb malformations, dermal pigmentary changes, and a predisposition to the development of malignancies. At the cellular level it is associated with hypersensitivity to DNA-damaging agents, increased chromosome instability and defec tive DNA repair. [Load More]
[Reviewed by Andrés Caballero-Oteyza on ]
Associated conditions
Please mind that curation (inclusion of all reported patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of FANCE
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
201 | ENST00000229769.3 | 1 | CCDS4805 | Select | protein_coding | 10 | Yes | 2576 | NM_021922 |
203 | ENST00000696264.1 | protein_coding | No | NM_001410876 | |||||
204 | ENST00000696265.1 | nonsense_mediated_decay | No | XM_047418301 |
Published variants
Found 0 variants
Var.name ⓘ | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that curation (inclusion of all reported gene variants) has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in FANCE
Please mind that curation (inclusion of all relevant literature) has not started yet. Please contact us if you want to volunteer.
ID | Year | Title | Journal | PMID | Variants |
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