Information on FANCE
Basic details
Alt. symbols: FACE | FAE
Approved name: FA complementation group E
Alt. names: Fanconi anemia complementation group E
Location: 6p21.31: 35452338 - 35467104 (+)
Gene type: protein_coding, 8 transcripts.
Scores: LoFtool: 0.818000 | pLI: 0.00313890 | LOEUF: 0.892
Normal function
This gene encodes the FANCE protein, which is one of the 8 proteins that form the Fanconi anemia (FA) core complex. The FA core complex, together with two additional proteins called Fanconi anemia-associated proteins (FAAPs), activates two proteins, called FANCD2 and FANCI, by a monoubiquitination process. The FA complex functions in DNA cross-links repair. FANCE is required for the nuclear accumulation of FANCC and provides a critical bridge between the FA complex and FANCD2. A nuclear complex containing FANCE protein (as well as FANCC, FANCF and FANCG) is essential for the activation of the FANCD2 protein to the mono-ubiquitinated isoform. All members of the Fanconi anemia complementation group do not share sequence similarity; they are related because they assemble together into the FA protein complex.
Dysfunction and disease
Biallelic loss-of-function mutations in this gene cause Fanconi anemia complementation group E (FANCE) [MIM:600901]: An inherited recessive disorder affecting the bone marrow that results in anemia, leukopenia and thrombopenia. It is associated with cardiac, renal and limb malformations, dermal pigmentary changes, and a predisposition to the development of malignancies. At the cellular level it is associated with hypersensitivity to DNA-damaging agents, increased chromosome instability and defec tive DNA repair. [Load More]
[Reviewed by Andrés Caballero-Oteyza on ]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of FANCE
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
201 | ENST00000229769.3 | 1 | CCDS4805 | Select | protein_coding | 10 | Yes | 2576 | NM_021922 |
203 | ENST00000696264.1 | protein_coding | No | NM_001410876 | |||||
204 | ENST00000696265.1 | nonsense_mediated_decay | No | XM_047418301 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
Year | Paradigm ⓘ | PMID | Notes |
---|---|---|---|
- | Regions of Homology | - | |
- | Cryptic splicing | - | Unreported or not recorded in our DB. |
- | Uniparental disomy | - | Unreported or not recorded in our DB. |
- | Mosaicism | - | Unreported or not recorded in our DB. |
- | Incomplete penetrance | - | Unreported or not recorded in our DB. |
- | Di-/oligo-genic inheritance | - | Unreported or not recorded in our DB. |
- | Somatic reversion | - | Unreported or not recorded in our DB. |
References linked to variants in FANCE
ID | Year | Title | Journal | PMID | Variants |
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