Information on FNIP1
Basic details
Alt. symbols: KIAA1961
Approved name: folliculin interacting protein 1
Alt. names: folliculininteracting protein 1
Location: 5q31.1: 131641714 - 131797017 (-)
Gene type: protein_coding, 5 transcripts.
Scores: LoFtool: 0.431000 | pLI: 0.99981945 | LOEUF: 0.251
Normal function
FNIP1 encodes a protein that forms a complex with FNIP2 and folliculin (FLCN) to interact with and regulate the function of AMP-activated protein kinase (AMPK), a master sensor of energy utilization that activates key catabolic pathways upon energy deprivation and cellular stress.
Dysfunction and disease
In 2020, Niehuis et al. identified homozygous FNIP1 mutations in 3 patients from 2 consanguineous families with early onset recurrent sinopulmonary and GI infections (PMID: 3281500) - at least two showed hypogammaglobulinemia (IgG, IgM), reduced absolute and relative switched memory B cells, a pre-B cell stage differentiation block, and cardiac abnormalities reminiscent of FNIP1-deficient murine phenotypes (PMID: 22608497). But unlike the mouse model, all 3 patients showed peripheral T-cell lymp hocytosis and intermittent neutropenia. Saettini et al. (2021) subsequently identified biallelic mutations in 3 additional unrelated patients with agammaglobulinemia and absent circulating B cells, recurrent infections, and hypertrophic cardiomyopathy (PMID: 32905580). Again, some patients also showed intermittent or severe chronic neutropenia, as well as T-cell abnormalities (lymphocytosis and/or defective T-cell proliferation with increased apoptosis), another feature not seen in mouse models. Consistent with mouse data suggesting that FNIP1 may serve as part of a metabolic checkpoint during B cell development, the authors found evidence of altered cellular metabolism, including increased mitochondrial number and activity in Bcells and constitutive hyperactivation of downstream PI3K targets in B cell precursors. [Load More]
[Reviewed by Xiao P. Peng on 2022-07-10 05:34:21]
Associated conditions
Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.
Transcripts of FNIP1
Name | ENSEMBL_ID | LRG_ID | CCDS_ID | MANE | Transcript.type | Exons | Canonical | CDS_length | REFSEQ_ID |
---|---|---|---|---|---|---|---|---|---|
202 | ENST00000307968.11 | CCDS34226 | protein_coding | 17 | No | 6388 | NM_001008738 | ||
201 | ENST00000307954.12 | CCDS87320 | protein_coding | 17 | No | 6366 | NM_001346114 | ||
204 | ENST00000511848.1 | CCDS87321 | protein_coding | 13 | No | 1720 | NM_001346113 | ||
203 | ENST00000510461.6 | CCDS34227 | Select | protein_coding | 18 | Yes | 6568 | NM_133372 |
Published variants
Found 0 variants
Var.name | Exon/Intron | cDNA_pos. | CDS_change | Prot.change | Var.type | Var.class. | Patients |
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Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.
Diagnostic pitfalls & paradigms
Considerations to take into account when analyzing this gene
References linked to variants in FNIP1
ID | Year | Title | Journal | PMID | Variants |
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