Information on FNIP1

Basic details

Alt. symbols: KIAA1961

Approved name: folliculin interacting protein 1
Alt. names: folliculininteracting protein 1

Location: 5q31.1: 131641714 - 131797017 (-)
Gene type: protein_coding, 5 transcripts.

Scores: LoFtool: 0.431000 | pLI: 0.99981945 | LOEUF: 0.251

HGNC: 29418

NCBI: 96459, RefSeq: .0

Ensembl: ENSG00000217128.13

LRG_ | Status: none

OMIM: 610594

Expression | ProteinAtlas

Normal function

FNIP1 encodes a protein that forms a complex with FNIP2 and folliculin (FLCN) to interact with and regulate the function of AMP-activated protein kinase (AMPK), a master sensor of energy utilization that activates key catabolic pathways upon energy deprivation and cellular stress.

Dysfunction and disease

In 2020, Niehuis et al. identified homozygous FNIP1 mutations in 3 patients from 2 consanguineous families with early onset recurrent sinopulmonary and GI infections (PMID: 3281500) - at least two showed hypogammaglobulinemia (IgG, IgM), reduced absolute and relative switched memory B cells, a pre-B cell stage differentiation block, and cardiac abnormalities reminiscent of FNIP1-deficient murine phenotypes (PMID: 22608497). But unlike the mouse model, all 3 patients showed peripheral T-cell lymp hocytosis and intermittent neutropenia. Saettini et al. (2021) subsequently identified biallelic mutations in 3 additional unrelated patients with agammaglobulinemia and absent circulating B cells, recurrent infections, and hypertrophic cardiomyopathy (PMID: 32905580). Again, some patients also showed intermittent or severe chronic neutropenia, as well as T-cell abnormalities (lymphocytosis and/or defective T-cell proliferation with increased apoptosis), another feature not seen in mouse models. Consistent with mouse data suggesting that FNIP1 may serve as part of a metabolic checkpoint during B cell development, the authors found evidence of altered cellular metabolism, including increased mitochondrial number and activity in Bcells and constitutive hyperactivation of downstream PI3K targets in B cell precursors. [Load More]

[Reviewed by Xiao P. Peng on 2022-07-10 05:34:21]

Associated conditions

Acronym Condition's_name MOI Mode_of_actionwww icon OMIM_ID No.cases
AGM15 Agammaglobulinemia 15 ARdict. icon 619705www icon 0 (0 fams)

Please mind that full curation (inclusion of all published patients) of this gene has not started yet. Please contact us if you want to volunteer.

Transcripts of FNIP1

Name ENSEMBL_ID LRG_ID CCDS_ID MANE Transcript.type Exons Canonical CDS_length REFSEQ_ID
202 ENST00000307968.11 CCDS34226 protein_coding 17 No 6388 NM_001008738
201 ENST00000307954.12 CCDS87320 protein_coding 17 No 6366 NM_001346114
204 ENST00000511848.1 CCDS87321 protein_coding 13 No 1720 NM_001346113
203 ENST00000510461.6 CCDS34227 Select protein_coding 18 Yes 6568 NM_133372

Published variants

Found 0 variants

Var.name Exon/Intron cDNA_pos. CDS_change Prot.change Var.type Var.class. Patients

Please mind that full curation (inclusion of all published variants) of this gene has not started yet. Please contact us if you want to volunteer.

Diagnostic pitfalls & paradigms

Considerations to take into account when analyzing this gene

Year Paradigm ⓘ PMID Notes
- Regions of Homology -
2021Uniparental disomy32905580
-Cryptic splicing-Unreported or not recorded in our DB.
-Mosaicism-Unreported or not recorded in our DB.
-Incomplete penetrance-Unreported or not recorded in our DB.
-Di-/oligo-genic inheritance-Unreported or not recorded in our DB.
-Somatic reversion-Unreported or not recorded in our DB.

References linked to variants in FNIP1

ID Year Title Journal PMID Variants

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